Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 AC246785.2-201ENST00000432512 513 ntBASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 AL513523.2-202ENST00000427283 2040 ntBASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 AC063926.3-201ENST00000624734 5658 ntBASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 AL121672.3-201ENST00000608644 468 ntBASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 AL049757.1-201ENST00000616842 1596 ntBASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB4Q9UN71 LINC02228-204ENST00000642115 2962 ntBASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 FAM210CP-201ENST00000445714 574 ntBASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 STK19B-204ENST00000512515 211 ntBASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 KRT18P21-201ENST00000515767 1272 ntBASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 AC005336.2-201ENST00000593183 939 ntBASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 KRT8P10-201ENST00000450021 1447 ntBASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms