Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 AL135744.1-201ENST00000565098 629 ntBASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 AL391256.1-201ENST00000443260 1855 ntBASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 KRT8P48-201ENST00000515599 1220 ntBASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
UBQLN1Q9UMX0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.02■□□□□ 0.47
UBQLN1Q9UMX0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
UBQLN1Q9UMX0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.02■□□□□ 0.47
UBQLN1Q9UMX0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN1Q9UMX0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN1Q9UMX0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.02■□□□□ 0.47
UBQLN1Q9UMX0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN1Q9UMX0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
UBQLN1Q9UMX0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.02■□□□□ 0.47
UBQLN1Q9UMX0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.01■□□□□ 0.47
UBQLN1Q9UMX0 AL139011.1-202ENST00000642063 584 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms