Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPO2Q9UMS6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.24■□□□□ 0.67
SYNPO2Q9UMS6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 MIR943-201ENST00000401286 94 ntBASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 FAM8A3P-201ENST00000427218 844 ntBASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 AC093724.1-201ENST00000448659 1027 ntBASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 GPAA1P2-202ENST00000606848 1787 ntBASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPO2Q9UMS6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 AL035456.1-201ENST00000456064 1369 ntBASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms