Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 AC004706.3-202ENST00000621574 984 ntBASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKIPSDQ9NZQ3 AC092053.1-201ENST00000605787 1936 ntBASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 KLF4P1-201ENST00000412782 1185 ntBASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 AC007967.2-201ENST00000432613 625 ntBASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 AC004967.1-201ENST00000453589 447 ntBASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 AC064836.3-201ENST00000607928 673 ntBASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 FLJ38576-201ENST00000623820 2459 ntBASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 UBALD1-205ENST00000590891 2641 ntBASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCKIPSDQ9NZQ3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NCKIPSDQ9NZQ3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms