Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MRPL20P1-201ENST00000400819 433 ntBASIC14.44□□□□□ -0.1
GCM1Q9NP62 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 PRSS29P-201ENST00000440800 595 ntBASIC14.43□□□□□ -0.1
GCM1Q9NP62 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 MIR4751-201ENST00000578027 74 ntBASIC14.43□□□□□ -0.1
GCM1Q9NP62 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 AC010654.1-201ENST00000615722 808 ntBASIC14.43□□□□□ -0.1
GCM1Q9NP62 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GCM1Q9NP62 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
GCM1Q9NP62 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 FRMD8P1-201ENST00000440433 1524 ntBASIC14.42□□□□□ -0.1
GCM1Q9NP62 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 AP000347.1-202ENST00000435868 847 ntBASIC14.42□□□□□ -0.1
GCM1Q9NP62 AC087163.2-201ENST00000457299 853 ntBASIC14.42□□□□□ -0.1
GCM1Q9NP62 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms