Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.65■□□□□ 0.58
BPIFA3Q9BQP9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.64■□□□□ 0.58
BPIFA3Q9BQP9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.64■□□□□ 0.58
BPIFA3Q9BQP9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
BPIFA3Q9BQP9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.64■□□□□ 0.58
BPIFA3Q9BQP9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BPIFA3Q9BQP9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 AC211429.1-201ENST00000415277 523 ntBASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 AC005332.1-201ENST00000577698 1310 ntBASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 PKD1P1-201ENST00000458669 6805 ntBASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 AC126177.1-201ENST00000547829 2218 ntBASIC18.64■□□□□ 0.57
BPIFA3Q9BQP9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 LINC00554-201ENST00000564841 3011 ntBASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 AC010491.1-201ENST00000563101 2797 ntBASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 AL031133.1-201ENST00000406807 723 ntBASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 AP002383.4-201ENST00000442518 975 ntBASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 TSSC2-201ENST00000450217 709 ntBASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 MPDU1-223ENST00000582151 728 ntBASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BPIFA3Q9BQP9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms