Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
TRGV9Q99603 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
TRGV9Q99603 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.18□□□□□ -0.3
TRGV9Q99603 AC104819.1-201ENST00000504587 486 ntBASIC13.18□□□□□ -0.3
TRGV9Q99603 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.18□□□□□ -0.3
TRGV9Q99603 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 TERC-201ENST00000602385 541 ntBASIC13.18□□□□□ -0.3
TRGV9Q99603 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.18□□□□□ -0.3
TRGV9Q99603 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 PCDHA1-201ENST00000378133 2726 ntBASIC13.18□□□□□ -0.3
TRGV9Q99603 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
TRGV9Q99603 AC092364.2-201ENST00000596710 2692 ntBASIC13.17□□□□□ -0.3
TRGV9Q99603 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRGV9Q99603 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV9Q99603 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 AL590787.1-201ENST00000568856 1315 ntBASIC13.17□□□□□ -0.3
TRGV9Q99603 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV9Q99603 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRGV9Q99603 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRGV9Q99603 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV9Q99603 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV9Q99603 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV9Q99603 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.17□□□□□ -0.3
TRGV9Q99603 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
TRGV9Q99603 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV9Q99603 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.17□□□□□ -0.3
TRGV9Q99603 AL353135.1-201ENST00000606729 504 ntBASIC13.17□□□□□ -0.3
TRGV9Q99603 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.17□□□□□ -0.3
TRGV9Q99603 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
TRGV9Q99603 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV9Q99603 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.17□□□□□ -0.3
TRGV9Q99603 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
TRGV9Q99603 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
TRGV9Q99603 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRGV9Q99603 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV9Q99603 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV9Q99603 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRGV9Q99603 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRGV9Q99603 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV9Q99603 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV9Q99603 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV9Q99603 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV9Q99603 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.16□□□□□ -0.3
TRGV9Q99603 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms