Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.96□□□□□ -0.17
S1PR3Q99500 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
S1PR3Q99500 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.96□□□□□ -0.17
S1PR3Q99500 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.96□□□□□ -0.17
S1PR3Q99500 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
S1PR3Q99500 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.96□□□□□ -0.17
S1PR3Q99500 IFNL4P1-201ENST00000607083 540 ntBASIC13.96□□□□□ -0.17
S1PR3Q99500 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
S1PR3Q99500 AL139288.1-201ENST00000623748 933 ntBASIC13.96□□□□□ -0.17
S1PR3Q99500 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
S1PR3Q99500 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
S1PR3Q99500 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.96□□□□□ -0.17
S1PR3Q99500 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 NCF1C-201ENST00000438382 1427 ntBASIC13.96□□□□□ -0.18
S1PR3Q99500 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.96□□□□□ -0.18
S1PR3Q99500 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
S1PR3Q99500 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
S1PR3Q99500 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
S1PR3Q99500 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
S1PR3Q99500 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.96□□□□□ -0.18
S1PR3Q99500 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
S1PR3Q99500 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
S1PR3Q99500 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
S1PR3Q99500 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.96□□□□□ -0.18
S1PR3Q99500 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.96□□□□□ -0.18
S1PR3Q99500 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
S1PR3Q99500 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
S1PR3Q99500 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.95□□□□□ -0.18
S1PR3Q99500 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
S1PR3Q99500 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
S1PR3Q99500 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.95□□□□□ -0.18
S1PR3Q99500 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.95□□□□□ -0.18
S1PR3Q99500 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
S1PR3Q99500 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.95□□□□□ -0.18
S1PR3Q99500 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
S1PR3Q99500 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.95□□□□□ -0.18
S1PR3Q99500 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.95□□□□□ -0.18
S1PR3Q99500 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.95□□□□□ -0.18
S1PR3Q99500 AC106795.1-205ENST00000512851 1056 ntBASIC13.95□□□□□ -0.18
S1PR3Q99500 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
S1PR3Q99500 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.95□□□□□ -0.18
S1PR3Q99500 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.95□□□□□ -0.18
S1PR3Q99500 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.95□□□□□ -0.18
S1PR3Q99500 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.95□□□□□ -0.18
S1PR3Q99500 AP001269.4-201ENST00000609611 512 ntBASIC13.95□□□□□ -0.18
S1PR3Q99500 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.95□□□□□ -0.18
S1PR3Q99500 AL022326.1-202ENST00000641533 845 ntBASIC13.95□□□□□ -0.18
S1PR3Q99500 UBALD1-205ENST00000590891 2641 ntBASIC13.95□□□□□ -0.18
S1PR3Q99500 RNF216P1-203ENST00000404404 2427 ntBASIC13.95□□□□□ -0.18
S1PR3Q99500 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.95□□□□□ -0.18
S1PR3Q99500 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
S1PR3Q99500 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
S1PR3Q99500 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.95□□□□□ -0.18
S1PR3Q99500 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
S1PR3Q99500 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
S1PR3Q99500 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
S1PR3Q99500 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
S1PR3Q99500 AC078925.2-201ENST00000624013 1973 ntBASIC13.94□□□□□ -0.18
S1PR3Q99500 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
S1PR3Q99500 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
S1PR3Q99500 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms