Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB3IPQ96QF0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 OR2I1P-210ENST00000642037 4691 ntBASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IPQ96QF0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 OR2I1P-209ENST00000641730 5365 ntBASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAB3IPQ96QF0 AC233263.1-201ENST00000578059 224 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms