Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 PVRIG2P-201ENST00000435460 978 ntBASIC12.82□□□□□ -0.36
AP1S3Q96PC3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 MIR3917-201ENST00000580971 93 ntBASIC12.82□□□□□ -0.36
AP1S3Q96PC3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 ITM2C-210ENST00000620962 501 ntBASIC12.82□□□□□ -0.36
AP1S3Q96PC3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
AP1S3Q96PC3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 AC106886.4-201ENST00000623557 2502 ntBASIC12.81□□□□□ -0.36
AP1S3Q96PC3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 AP000523.1-201ENST00000398242 1049 ntBASIC12.81□□□□□ -0.36
AP1S3Q96PC3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 RBM17P1-201ENST00000453646 1190 ntBASIC12.81□□□□□ -0.36
AP1S3Q96PC3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 DMBT1P1-203ENST00000636837 4628 ntBASIC12.81□□□□□ -0.36
AP1S3Q96PC3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.81□□□□□ -0.36
AP1S3Q96PC3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms