Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASD1Q96PB1 GAPDHP21-201ENST00000450301 1010 ntBASIC17.83■□□□□ 0.44
CASD1Q96PB1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.83■□□□□ 0.44
CASD1Q96PB1 AC009118.2-201ENST00000613275 655 ntBASIC17.83■□□□□ 0.44
CASD1Q96PB1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASD1Q96PB1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CASD1Q96PB1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CASD1Q96PB1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASD1Q96PB1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASD1Q96PB1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CASD1Q96PB1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.83■□□□□ 0.44
CASD1Q96PB1 AC067852.2-201ENST00000590513 2313 ntBASIC17.83■□□□□ 0.44
CASD1Q96PB1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASD1Q96PB1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASD1Q96PB1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.83■□□□□ 0.44
CASD1Q96PB1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.83■□□□□ 0.44
CASD1Q96PB1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASD1Q96PB1 AC092068.3-201ENST00000587894 2016 ntBASIC17.82■□□□□ 0.44
CASD1Q96PB1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 SPDYE22P-201ENST00000582158 798 ntBASIC17.82■□□□□ 0.44
CASD1Q96PB1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.82■□□□□ 0.44
CASD1Q96PB1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.82■□□□□ 0.44
CASD1Q96PB1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASD1Q96PB1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 PIN1P1-201ENST00000412108 996 ntBASIC17.81■□□□□ 0.44
CASD1Q96PB1 AL353705.2-201ENST00000428243 662 ntBASIC17.81■□□□□ 0.44
CASD1Q96PB1 AC009477.1-201ENST00000452936 217 ntBASIC17.81■□□□□ 0.44
CASD1Q96PB1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 AC098859.1-201ENST00000502915 1238 ntBASIC17.81■□□□□ 0.44
CASD1Q96PB1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 RN7SL828P-201ENST00000607615 303 ntBASIC17.81■□□□□ 0.44
CASD1Q96PB1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 TEX28P1-201ENST00000613479 1221 ntBASIC17.81■□□□□ 0.44
CASD1Q96PB1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 TEX28P2-201ENST00000617764 1221 ntBASIC17.81■□□□□ 0.44
CASD1Q96PB1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASD1Q96PB1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.81■□□□□ 0.44
CASD1Q96PB1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CASD1Q96PB1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASD1Q96PB1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASD1Q96PB1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASD1Q96PB1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASD1Q96PB1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.8■□□□□ 0.44
CASD1Q96PB1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CASD1Q96PB1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASD1Q96PB1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASD1Q96PB1 SPTLC1P1-201ENST00000447199 261 ntBASIC17.8■□□□□ 0.44
CASD1Q96PB1 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.8■□□□□ 0.44
CASD1Q96PB1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASD1Q96PB1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms