Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 KRT89P-201ENST00000620027 1478 ntBASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 AC006058.4-201ENST00000624016 1670 ntBASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 AC096633.1-201ENST00000422446 749 ntBASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 ECEL1P3-201ENST00000427961 737 ntBASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 AC145285.6-201ENST00000604632 637 ntBASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 TNRC18P2-201ENST00000417666 2714 ntBASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP6Q96FZ7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 TUBB8P12-201ENST00000308911 1335 ntBASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 TUBB7P-202ENST00000428444 1305 ntBASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 TUBB8P7-204ENST00000567960 1332 ntBASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 NEK4P2-201ENST00000580004 1012 ntBASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 AC140113.3-201ENST00000605663 199 ntBASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 AC141257.4-201ENST00000634557 245 ntBASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 AC136944.6-201ENST00000634818 245 ntBASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP6Q96FZ7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP6Q96FZ7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms