Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 AC005521.1-201ENST00000393351 872 ntBASIC16.09■□□□□ 0.17
LRRC58Q96CX6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 NUS1P1-201ENST00000446295 882 ntBASIC16.09■□□□□ 0.17
LRRC58Q96CX6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC58Q96CX6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC58Q96CX6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
LRRC58Q96CX6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC58Q96CX6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC58Q96CX6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
LRRC58Q96CX6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC58Q96CX6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 AL596087.1-201ENST00000400979 1969 ntBASIC16.08■□□□□ 0.16
LRRC58Q96CX6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 AP002414.1-201ENST00000391405 1147 ntBASIC16.08■□□□□ 0.16
LRRC58Q96CX6 RCN1P1-201ENST00000400413 996 ntBASIC16.08■□□□□ 0.16
LRRC58Q96CX6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.08■□□□□ 0.16
LRRC58Q96CX6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LRRC58Q96CX6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 SIGLEC30P-201ENST00000455569 941 ntBASIC16.07■□□□□ 0.16
LRRC58Q96CX6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 AC011498.5-201ENST00000592027 486 ntBASIC16.07■□□□□ 0.16
LRRC58Q96CX6 AL139011.1-202ENST00000642063 584 ntBASIC16.07■□□□□ 0.16
LRRC58Q96CX6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC58Q96CX6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 AC006277.1-201ENST00000624348 1610 ntBASIC16.06■□□□□ 0.16
LRRC58Q96CX6 AC148477.5-201ENST00000625164 1645 ntBASIC16.06■□□□□ 0.16
LRRC58Q96CX6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 PMPCAP1-201ENST00000508114 1576 ntBASIC16.06■□□□□ 0.16
LRRC58Q96CX6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms