Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRQ92834 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRQ92834 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRQ92834 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRQ92834 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRQ92834 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RPGRQ92834 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.62■□□□□ 0.89
RPGRQ92834 AC009477.1-201ENST00000452936 217 ntBASIC20.62■□□□□ 0.89
RPGRQ92834 MEIS3P1-201ENST00000495167 958 ntBASIC20.62■□□□□ 0.89
RPGRQ92834 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.62■□□□□ 0.89
RPGRQ92834 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.62■□□□□ 0.89
RPGRQ92834 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.62■□□□□ 0.89
RPGRQ92834 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.62■□□□□ 0.89
RPGRQ92834 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RPGRQ92834 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
RPGRQ92834 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.62■□□□□ 0.89
RPGRQ92834 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRQ92834 CETN4P-206ENST00000642099 2168 ntBASIC20.62■□□□□ 0.89
RPGRQ92834 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRQ92834 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRQ92834 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRQ92834 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.61■□□□□ 0.89
RPGRQ92834 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RPGRQ92834 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.61■□□□□ 0.89
RPGRQ92834 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RPGRQ92834 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.61■□□□□ 0.89
RPGRQ92834 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 AC108860.2-201ENST00000562760 2183 ntBASIC20.61■□□□□ 0.89
RPGRQ92834 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.61■□□□□ 0.89
RPGRQ92834 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RPGRQ92834 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.61■□□□□ 0.89
RPGRQ92834 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.61■□□□□ 0.89
RPGRQ92834 AL589739.1-201ENST00000607720 493 ntBASIC20.61■□□□□ 0.89
RPGRQ92834 TEX28P1-201ENST00000613479 1221 ntBASIC20.61■□□□□ 0.89
RPGRQ92834 SPTSSB-204ENST00000617024 1292 ntBASIC20.61■□□□□ 0.89
RPGRQ92834 TEX28P2-201ENST00000617764 1221 ntBASIC20.61■□□□□ 0.89
RPGRQ92834 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RPGRQ92834 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.61■□□□□ 0.89
RPGRQ92834 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRQ92834 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.6■□□□□ 0.89
RPGRQ92834 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.6■□□□□ 0.89
RPGRQ92834 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.6■□□□□ 0.89
RPGRQ92834 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RPGRQ92834 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RPGRQ92834 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RPGRQ92834 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.6■□□□□ 0.89
RPGRQ92834 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RPGRQ92834 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RPGRQ92834 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
RPGRQ92834 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.6■□□□□ 0.89
RPGRQ92834 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 KRT17P7-201ENST00000451704 1104 ntBASIC20.6■□□□□ 0.89
RPGRQ92834 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.6■□□□□ 0.89
RPGRQ92834 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.6■□□□□ 0.89
RPGRQ92834 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.6■□□□□ 0.89
RPGRQ92834 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.6■□□□□ 0.89
RPGRQ92834 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.6■□□□□ 0.89
RPGRQ92834 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.6■□□□□ 0.89
RPGRQ92834 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
RPGRQ92834 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
RPGRQ92834 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.6■□□□□ 0.89
RPGRQ92834 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
RPGRQ92834 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRQ92834 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RPGRQ92834 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRQ92834 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRQ92834 AL138688.1-201ENST00000624851 1594 ntBASIC20.59■□□□□ 0.89
RPGRQ92834 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRQ92834 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.59■□□□□ 0.89
RPGRQ92834 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RPGRQ92834 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRQ92834 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RPGRQ92834 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
RPGRQ92834 AC087499.5-201ENST00000452760 1342 ntBASIC20.59■□□□□ 0.89
RPGRQ92834 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms