Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 UBE2SP1-201ENST00000450587 669 ntBASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 AC068472.1-201ENST00000474589 881 ntBASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 NEK4P2-201ENST00000580004 1012 ntBASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.26□□□□□ -0.29
MBD3L1Q8WWY6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 AC063926.3-201ENST00000624734 5658 ntBASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 AC112504.1-201ENST00000623415 1841 ntBASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 GGT3P-204ENST00000453783 1664 ntBASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 AC111152.3-201ENST00000569699 673 ntBASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L1Q8WWY6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms