Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CT55Q8WUE5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CT55Q8WUE5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CT55Q8WUE5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CT55Q8WUE5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CT55Q8WUE5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CT55Q8WUE5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CT55Q8WUE5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CT55Q8WUE5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CT55Q8WUE5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CT55Q8WUE5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CT55Q8WUE5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CT55Q8WUE5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 AC124947.2-201ENST00000547118 1133 ntBASIC15.62■□□□□ 0.09
CT55Q8WUE5 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.62■□□□□ 0.09
CT55Q8WUE5 AC003101.2-201ENST00000612557 442 ntBASIC15.62■□□□□ 0.09
CT55Q8WUE5 AC018529.1-201ENST00000613063 361 ntBASIC15.62■□□□□ 0.09
CT55Q8WUE5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 TUBB8P12-201ENST00000308911 1335 ntBASIC15.62■□□□□ 0.09
CT55Q8WUE5 TUBB7P-202ENST00000428444 1305 ntBASIC15.62■□□□□ 0.09
CT55Q8WUE5 TUBB8P7-204ENST00000567960 1332 ntBASIC15.62■□□□□ 0.09
CT55Q8WUE5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CT55Q8WUE5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CT55Q8WUE5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.61■□□□□ 0.09
CT55Q8WUE5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.61■□□□□ 0.09
CT55Q8WUE5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.61■□□□□ 0.09
CT55Q8WUE5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.61■□□□□ 0.09
CT55Q8WUE5 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CT55Q8WUE5 PRYP6-201ENST00000514804 343 ntBASIC15.61■□□□□ 0.09
CT55Q8WUE5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.61■□□□□ 0.09
CT55Q8WUE5 AC073389.1-201ENST00000595595 795 ntBASIC15.61■□□□□ 0.09
CT55Q8WUE5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.61■□□□□ 0.09
CT55Q8WUE5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 AP3S2-216ENST00000617003 1561 ntBASIC15.61■□□□□ 0.09
CT55Q8WUE5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.61■□□□□ 0.09
CT55Q8WUE5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CT55Q8WUE5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CT55Q8WUE5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CT55Q8WUE5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CT55Q8WUE5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CT55Q8WUE5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.6■□□□□ 0.09
CT55Q8WUE5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.6■□□□□ 0.09
CT55Q8WUE5 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.6■□□□□ 0.09
CT55Q8WUE5 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.6■□□□□ 0.09
CT55Q8WUE5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.6■□□□□ 0.09
CT55Q8WUE5 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.6■□□□□ 0.09
CT55Q8WUE5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.6■□□□□ 0.09
CT55Q8WUE5 LINC02560-201ENST00000596379 459 ntBASIC15.6■□□□□ 0.09
CT55Q8WUE5 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.6■□□□□ 0.09
CT55Q8WUE5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.6■□□□□ 0.09
CT55Q8WUE5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CT55Q8WUE5 AC073592.8-201ENST00000624126 511 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms