Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC109462.3-201ENST00000573934 613 ntBASIC12.65□□□□□ -0.38
NUP35Q8NFH5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 AL157888.1-201ENST00000631930 593 ntBASIC12.65□□□□□ -0.38
NUP35Q8NFH5 AC073648.6-201ENST00000641589 218 ntBASIC12.65□□□□□ -0.38
NUP35Q8NFH5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
NUP35Q8NFH5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.39
NUP35Q8NFH5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NUP35Q8NFH5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.65□□□□□ -0.39
NUP35Q8NFH5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
NUP35Q8NFH5 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.64□□□□□ -0.39
NUP35Q8NFH5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 ESRRAP1-201ENST00000400596 1257 ntBASIC12.64□□□□□ -0.39
NUP35Q8NFH5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 AC019129.2-201ENST00000609837 1235 ntBASIC12.64□□□□□ -0.39
NUP35Q8NFH5 AC004263.2-201ENST00000617183 678 ntBASIC12.64□□□□□ -0.39
NUP35Q8NFH5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
NUP35Q8NFH5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 AL009178.2-201ENST00000597278 2719 ntBASIC12.63□□□□□ -0.39
NUP35Q8NFH5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 AC007663.1-201ENST00000438948 1240 ntBASIC12.63□□□□□ -0.39
NUP35Q8NFH5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms