Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 AC136632.2-201ENST00000512891 861 ntBASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 IGHV3-22-201ENST00000520721 359 ntBASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 TERC-201ENST00000602385 541 ntBASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 AL356488.2-201ENST00000602755 427 ntBASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf42Q8N5U0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 AC092910.1-201ENST00000482027 1129 ntBASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 AC093909.1-201ENST00000504731 1122 ntBASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 AL805961.1-202ENST00000641562 540 ntBASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 AC092850.2-201ENST00000623821 2697 ntBASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 AP001094.4-201ENST00000579008 2176 ntBASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf42Q8N5U0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
C11orf42Q8N5U0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C11orf42Q8N5U0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
C11orf42Q8N5U0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms