Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 COX20P2-201ENST00000452636 358 ntBASIC17.11■□□□□ 0.33
PGBD3Q8N328 RNA5SP421-201ENST00000516864 134 ntBASIC17.11■□□□□ 0.33
PGBD3Q8N328 AC107918.2-201ENST00000530817 355 ntBASIC17.11■□□□□ 0.33
PGBD3Q8N328 AC069262.1-201ENST00000539058 672 ntBASIC17.11■□□□□ 0.33
PGBD3Q8N328 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 DUX4L27-201ENST00000554796 1261 ntBASIC17.11■□□□□ 0.33
PGBD3Q8N328 DUX4L17-201ENST00000557360 1267 ntBASIC17.11■□□□□ 0.33
PGBD3Q8N328 AL135744.1-201ENST00000565098 629 ntBASIC17.11■□□□□ 0.33
PGBD3Q8N328 RARRES2P8-201ENST00000566335 367 ntBASIC17.11■□□□□ 0.33
PGBD3Q8N328 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 MIR4745-201ENST00000577608 62 ntBASIC17.11■□□□□ 0.33
PGBD3Q8N328 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 AL161645.1-201ENST00000622716 1255 ntBASIC17.11■□□□□ 0.33
PGBD3Q8N328 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 LYSMD4-203ENST00000378904 2122 ntBASIC17.11■□□□□ 0.33
PGBD3Q8N328 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD3Q8N328 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PGBD3Q8N328 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD3Q8N328 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PGBD3Q8N328 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.1■□□□□ 0.33
PGBD3Q8N328 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD3Q8N328 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD3Q8N328 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD3Q8N328 CNN2P2-201ENST00000443536 909 ntBASIC17.1■□□□□ 0.33
PGBD3Q8N328 CNN2P3-201ENST00000450201 906 ntBASIC17.1■□□□□ 0.33
PGBD3Q8N328 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD3Q8N328 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 AL136317.3-201ENST00000618497 906 ntBASIC17.1■□□□□ 0.33
PGBD3Q8N328 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PGBD3Q8N328 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.1■□□□□ 0.33
PGBD3Q8N328 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.1■□□□□ 0.33
PGBD3Q8N328 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD3Q8N328 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 INGX-202ENST00000489074 768 ntBASIC17.09■□□□□ 0.33
PGBD3Q8N328 AC069335.1-201ENST00000489972 472 ntBASIC17.09■□□□□ 0.33
PGBD3Q8N328 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms