Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 AC006011.2-201ENST00000621313 1158 ntBASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 INTS4P1-201ENST00000438455 1935 ntBASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 TP73-AS1-210ENST00000637775 1455 ntBASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LINC01561Q8N1V8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 OVCH1-AS1-204ENST00000641955 5529 ntBASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 LINC02228-204ENST00000642115 2962 ntBASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 CHCHD2P8-201ENST00000429873 447 ntBASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 AL121672.3-201ENST00000608644 468 ntBASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 AP000867.4-201ENST00000641616 219 ntBASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 AL365203.3-201ENST00000609742 2057 ntBASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms