Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 AC116407.3-201ENST00000623905 1129 ntBASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 AC099398.1-201ENST00000567919 2776 ntBASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 AC098831.1-202ENST00000438821 336 ntBASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 AC004790.2-201ENST00000623588 572 ntBASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 PCDHA14-201ENST00000506751 2298 ntBASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC65Q8IXS2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 HLA-A-202ENST00000376806 1854 ntBASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 AL139011.1-202ENST00000642063 584 ntBASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 AL353732.1-201ENST00000569618 1459 ntBASIC18.71■□□□□ 0.59
CCDC65Q8IXS2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC65Q8IXS2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC65Q8IXS2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC65Q8IXS2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
CCDC65Q8IXS2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC65Q8IXS2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC65Q8IXS2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC65Q8IXS2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC65Q8IXS2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC65Q8IXS2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC65Q8IXS2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms