Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 RHOQP3-201ENST00000437982 621 ntBASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 POLD2P1-201ENST00000511220 997 ntBASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 PMS2P7-201ENST00000506558 1336 ntBASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 AL603756.1-201ENST00000606511 2163 ntBASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 BX842568.4-201ENST00000421222 227 ntBASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 RNA5SP416-201ENST00000516838 111 ntBASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 AC091167.2-201ENST00000579581 588 ntBASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 MIR4492-201ENST00000581627 80 ntBASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 LINC00895-201ENST00000629028 1637 ntBASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCUBE3Q8IX30 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 AC092171.3-201ENST00000610122 2651 ntBASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 AC004877.2-201ENST00000623941 599 ntBASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.71■□□□□ 0.43
SCUBE3Q8IX30 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCUBE3Q8IX30 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.71■□□□□ 0.42
SCUBE3Q8IX30 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SCUBE3Q8IX30 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 UBALD1-205ENST00000590891 2641 ntBASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms