Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TTC39BQ5VTQ0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TTC39BQ5VTQ0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TTC39BQ5VTQ0 PCDHB19P-201ENST00000570871 2371 ntBASIC17.58■□□□□ 0.41
TTC39BQ5VTQ0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TTC39BQ5VTQ0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TTC39BQ5VTQ0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 AC129492.6-201ENST00000611383 1305 ntBASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 AC007967.2-201ENST00000432613 625 ntBASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 HCG4B-203ENST00000450128 991 ntBASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 FLJ38576-201ENST00000623820 2459 ntBASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TTC39BQ5VTQ0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 POLD2P1-201ENST00000511220 997 ntBASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 OR7E47P-204ENST00000575924 449 ntBASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
TTC39BQ5VTQ0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 MIR940-201ENST00000401276 94 ntBASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 AC040169.1-201ENST00000565382 521 ntBASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms