Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 AL512652.2-201ENST00000625156 1716 ntBASIC20.5■□□□□ 0.87
TNNI3KQ59H18 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 AP006288.1-201ENST00000446065 395 ntBASIC20.5■□□□□ 0.87
TNNI3KQ59H18 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 AL671277.1-201ENST00000429656 993 ntBASIC20.49■□□□□ 0.87
TNNI3KQ59H18 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 AL161645.1-201ENST00000622716 1255 ntBASIC20.49■□□□□ 0.87
TNNI3KQ59H18 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNNI3KQ59H18 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 RARRES2P8-201ENST00000566335 367 ntBASIC20.48■□□□□ 0.87
TNNI3KQ59H18 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNNI3KQ59H18 AC021097.1-201ENST00000607902 574 ntBASIC20.48■□□□□ 0.87
TNNI3KQ59H18 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms