Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM35AQ53FP2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM35AQ53FP2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM35AQ53FP2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM35AQ53FP2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM35AQ53FP2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 AC145285.3-201ENST00000564603 959 ntBASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 CYP2A7P1-201ENST00000595391 815 ntBASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM35AQ53FP2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
TMEM35AQ53FP2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM35AQ53FP2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
TMEM35AQ53FP2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM35AQ53FP2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM35AQ53FP2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
TMEM35AQ53FP2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM35AQ53FP2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM35AQ53FP2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.02■□□□□ 0.15
TMEM35AQ53FP2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM35AQ53FP2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 HLA-A-202ENST00000376806 1854 ntBASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 AC026396.1-201ENST00000419388 421 ntBASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 ACTL9-202ENST00000612068 1252 ntBASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 KRT8P39-201ENST00000396270 1433 ntBASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM35AQ53FP2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TMEM35AQ53FP2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM35AQ53FP2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16■□□□□ 0.15
TMEM35AQ53FP2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16■□□□□ 0.15
TMEM35AQ53FP2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM35AQ53FP2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM35AQ53FP2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM35AQ53FP2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TMEM35AQ53FP2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16■□□□□ 0.15
TMEM35AQ53FP2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM35AQ53FP2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM35AQ53FP2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM35AQ53FP2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM35AQ53FP2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM35AQ53FP2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TMEM35AQ53FP2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms