Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 CTBP2P5-201ENST00000454986 1264 ntBASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 TPRX2P-201ENST00000535362 881 ntBASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 MIR3909-201ENST00000579518 119 ntBASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO4Q2I0M5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RSPO4Q2I0M5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RSPO4Q2I0M5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.21■□□□□ 0.18
RSPO4Q2I0M5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RSPO4Q2I0M5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 AL079307.3-201ENST00000556114 283 ntBASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 AC044860.1-202ENST00000559481 777 ntBASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 BTNL10-201ENST00000595971 695 ntBASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 AC243960.2-201ENST00000600996 747 ntBASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 AC090164.3-201ENST00000610780 2143 ntBASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 FZD10-202ENST00000539839 3282 ntBASIC16.2■□□□□ 0.18
RSPO4Q2I0M5 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 AC093525.8-201ENST00000624099 1342 ntBASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms