Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SSRP1Q08945 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
SSRP1Q08945 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.56■□□□□ 0.72
SSRP1Q08945 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 AL353732.1-201ENST00000569618 1459 ntBASIC19.56■□□□□ 0.72
SSRP1Q08945 AC092171.3-201ENST00000610122 2651 ntBASIC19.56■□□□□ 0.72
SSRP1Q08945 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.56■□□□□ 0.72
SSRP1Q08945 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
SSRP1Q08945 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.56■□□□□ 0.72
SSRP1Q08945 PRSS29P-201ENST00000440800 595 ntBASIC19.56■□□□□ 0.72
SSRP1Q08945 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.56■□□□□ 0.72
SSRP1Q08945 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.56■□□□□ 0.72
SSRP1Q08945 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.56■□□□□ 0.72
SSRP1Q08945 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SSRP1Q08945 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 AC131009.4-201ENST00000624048 1740 ntBASIC19.56■□□□□ 0.72
SSRP1Q08945 HLA-A-202ENST00000376806 1854 ntBASIC19.56■□□□□ 0.72
SSRP1Q08945 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.56■□□□□ 0.72
SSRP1Q08945 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SSRP1Q08945 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.56■□□□□ 0.72
SSRP1Q08945 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.56■□□□□ 0.72
SSRP1Q08945 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSRP1Q08945 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.56■□□□□ 0.72
SSRP1Q08945 SLC22A20-204ENST00000530038 1673 ntBASIC19.56■□□□□ 0.72
SSRP1Q08945 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.55■□□□□ 0.72
SSRP1Q08945 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SSRP1Q08945 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.55■□□□□ 0.72
SSRP1Q08945 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.55■□□□□ 0.72
SSRP1Q08945 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.55■□□□□ 0.72
SSRP1Q08945 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
SSRP1Q08945 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
SSRP1Q08945 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.55■□□□□ 0.72
SSRP1Q08945 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.55■□□□□ 0.72
SSRP1Q08945 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.55■□□□□ 0.72
SSRP1Q08945 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.55■□□□□ 0.72
SSRP1Q08945 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.55■□□□□ 0.72
SSRP1Q08945 CROCCP1-201ENST00000426910 5675 ntBASIC19.55■□□□□ 0.72
SSRP1Q08945 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSRP1Q08945 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.55■□□□□ 0.72
SSRP1Q08945 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.55■□□□□ 0.72
SSRP1Q08945 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.55■□□□□ 0.72
SSRP1Q08945 UBALD1-205ENST00000590891 2641 ntBASIC19.55■□□□□ 0.72
SSRP1Q08945 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.54■□□□□ 0.72
SSRP1Q08945 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SSRP1Q08945 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SSRP1Q08945 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.54■□□□□ 0.72
SSRP1Q08945 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.54■□□□□ 0.72
SSRP1Q08945 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SSRP1Q08945 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SSRP1Q08945 AC005412.3-201ENST00000580309 715 ntBASIC19.54■□□□□ 0.72
SSRP1Q08945 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.54■□□□□ 0.72
SSRP1Q08945 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.54■□□□□ 0.72
SSRP1Q08945 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SSRP1Q08945 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms