Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDH1Q08174 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH1Q08174 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDH1Q08174 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH1Q08174 RPS2P28-201ENST00000314255 741 ntBASIC16.28■□□□□ 0.2
PCDH1Q08174 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDH1Q08174 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDH1Q08174 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH1Q08174 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH1Q08174 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH1Q08174 AF186996.4-201ENST00000467186 377 ntBASIC16.28■□□□□ 0.2
PCDH1Q08174 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH1Q08174 RN7SL510P-201ENST00000581311 263 ntBASIC16.28■□□□□ 0.2
PCDH1Q08174 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH1Q08174 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDH1Q08174 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH1Q08174 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH1Q08174 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDH1Q08174 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH1Q08174 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
PCDH1Q08174 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH1Q08174 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH1Q08174 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDH1Q08174 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH1Q08174 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH1Q08174 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH1Q08174 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH1Q08174 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH1Q08174 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDH1Q08174 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH1Q08174 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PCDH1Q08174 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDH1Q08174 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH1Q08174 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDH1Q08174 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
PCDH1Q08174 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.27■□□□□ 0.2
PCDH1Q08174 AL356488.2-201ENST00000602755 427 ntBASIC16.27■□□□□ 0.2
PCDH1Q08174 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH1Q08174 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH1Q08174 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PCDH1Q08174 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PCDH1Q08174 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
PCDH1Q08174 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH1Q08174 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH1Q08174 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH1Q08174 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
PCDH1Q08174 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH1Q08174 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDH1Q08174 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH1Q08174 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
PCDH1Q08174 NFIC-211ENST00000641145 8399 ntBASIC16.27■□□□□ 0.19
PCDH1Q08174 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PCDH1Q08174 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDH1Q08174 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH1Q08174 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH1Q08174 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDH1Q08174 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH1Q08174 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH1Q08174 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDH1Q08174 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 AC004870.1-201ENST00000315132 882 ntBASIC16.26■□□□□ 0.19
PCDH1Q08174 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH1Q08174 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PCDH1Q08174 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH1Q08174 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.26■□□□□ 0.19
PCDH1Q08174 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDH1Q08174 AC079781.3-201ENST00000449110 356 ntBASIC16.26■□□□□ 0.19
PCDH1Q08174 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDH1Q08174 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH1Q08174 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH1Q08174 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH1Q08174 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH1Q08174 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH1Q08174 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms