Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPAQ06546 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.67■□□□□ 0.74
GABPAQ06546 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.67■□□□□ 0.74
GABPAQ06546 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.67■□□□□ 0.74
GABPAQ06546 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPAQ06546 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPAQ06546 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPAQ06546 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GABPAQ06546 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPAQ06546 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.66■□□□□ 0.74
GABPAQ06546 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GABPAQ06546 FOXO1B-201ENST00000504678 1527 ntBASIC19.66■□□□□ 0.74
GABPAQ06546 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GABPAQ06546 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GABPAQ06546 AC060834.1-201ENST00000443027 2032 ntBASIC19.66■□□□□ 0.74
GABPAQ06546 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.66■□□□□ 0.74
GABPAQ06546 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.66■□□□□ 0.74
GABPAQ06546 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 AC090340.1-201ENST00000620778 4980 ntBASIC19.66■□□□□ 0.74
GABPAQ06546 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.66■□□□□ 0.74
GABPAQ06546 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.66■□□□□ 0.74
GABPAQ06546 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.66■□□□□ 0.74
GABPAQ06546 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.66■□□□□ 0.74
GABPAQ06546 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.66■□□□□ 0.74
GABPAQ06546 CNN2P2-201ENST00000443536 909 ntBASIC19.66■□□□□ 0.74
GABPAQ06546 CNN2P3-201ENST00000450201 906 ntBASIC19.66■□□□□ 0.74
GABPAQ06546 AC067863.1-201ENST00000494933 530 ntBASIC19.66■□□□□ 0.74
GABPAQ06546 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.66■□□□□ 0.74
GABPAQ06546 DUX4L27-201ENST00000554796 1261 ntBASIC19.66■□□□□ 0.74
GABPAQ06546 SPCS2P1-201ENST00000561636 679 ntBASIC19.66■□□□□ 0.74
GABPAQ06546 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.66■□□□□ 0.74
GABPAQ06546 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.66■□□□□ 0.74
GABPAQ06546 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.66■□□□□ 0.74
GABPAQ06546 AL136317.3-201ENST00000618497 906 ntBASIC19.66■□□□□ 0.74
GABPAQ06546 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.66■□□□□ 0.74
GABPAQ06546 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
GABPAQ06546 KRT8P39-201ENST00000396270 1433 ntBASIC19.66■□□□□ 0.74
GABPAQ06546 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GABPAQ06546 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 AL645728.1-201ENST00000366221 2101 ntBASIC19.66■□□□□ 0.74
GABPAQ06546 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPAQ06546 AC008677.1-201ENST00000519230 1561 ntBASIC19.66■□□□□ 0.74
GABPAQ06546 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPAQ06546 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.65■□□□□ 0.74
GABPAQ06546 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
GABPAQ06546 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABPAQ06546 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABPAQ06546 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABPAQ06546 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.65■□□□□ 0.74
GABPAQ06546 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.65■□□□□ 0.74
GABPAQ06546 ALG1L8P-201ENST00000533887 760 ntBASIC19.65■□□□□ 0.74
GABPAQ06546 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
GABPAQ06546 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.65■□□□□ 0.74
GABPAQ06546 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPAQ06546 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
GABPAQ06546 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPAQ06546 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPAQ06546 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPAQ06546 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
GABPAQ06546 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPAQ06546 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.65■□□□□ 0.74
GABPAQ06546 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPAQ06546 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPAQ06546 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
GABPAQ06546 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
GABPAQ06546 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GABPAQ06546 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.64■□□□□ 0.74
GABPAQ06546 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPAQ06546 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.64■□□□□ 0.73
GABPAQ06546 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPAQ06546 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.64■□□□□ 0.73
GABPAQ06546 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.64■□□□□ 0.73
GABPAQ06546 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.64■□□□□ 0.73
GABPAQ06546 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.64■□□□□ 0.73
GABPAQ06546 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.64■□□□□ 0.73
GABPAQ06546 KRT18P34-201ENST00000488218 1270 ntBASIC19.64■□□□□ 0.73
GABPAQ06546 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.64■□□□□ 0.73
GABPAQ06546 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GABPAQ06546 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.64■□□□□ 0.73
GABPAQ06546 LINC02084-201ENST00000606069 1096 ntBASIC19.64■□□□□ 0.73
GABPAQ06546 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GABPAQ06546 AL139011.1-202ENST00000642063 584 ntBASIC19.64■□□□□ 0.73
GABPAQ06546 TUBB3P1-201ENST00000405796 1332 ntBASIC19.64■□□□□ 0.73
GABPAQ06546 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.64■□□□□ 0.73
GABPAQ06546 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPAQ06546 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms