Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 AC009533.2-201ENST00000543664 586 ntBASIC12.99□□□□□ -0.33
HIST1H1AQ02539 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 AL353801.3-201ENST00000609898 542 ntBASIC12.99□□□□□ -0.33
HIST1H1AQ02539 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 AC022188.1-201ENST00000620960 1664 ntBASIC12.99□□□□□ -0.33
HIST1H1AQ02539 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 KRT8P10-201ENST00000450021 1447 ntBASIC12.98□□□□□ -0.33
HIST1H1AQ02539 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 MINOS1P3-201ENST00000457048 203 ntBASIC12.98□□□□□ -0.33
HIST1H1AQ02539 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.98□□□□□ -0.33
HIST1H1AQ02539 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 AC099063.4-201ENST00000641099 1602 ntBASIC12.98□□□□□ -0.33
HIST1H1AQ02539 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 AC005915.1-201ENST00000624912 2018 ntBASIC12.98□□□□□ -0.33
HIST1H1AQ02539 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H1AQ02539 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 NORAD-201ENST00000565493 5339 ntBASIC12.97□□□□□ -0.33
HIST1H1AQ02539 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 TSSC2-201ENST00000450217 709 ntBASIC12.97□□□□□ -0.33
HIST1H1AQ02539 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 STK19B-204ENST00000512515 211 ntBASIC12.97□□□□□ -0.33
HIST1H1AQ02539 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms