Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL20P78556 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL20P78556 GGT4P-201ENST00000623672 1708 ntBASIC13.31□□□□□ -0.28
CCL20P78556 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 CICP24-201ENST00000605464 2705 ntBASIC13.31□□□□□ -0.28
CCL20P78556 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CCL20P78556 MYCLP1-201ENST00000372451 1075 ntBASIC13.31□□□□□ -0.28
CCL20P78556 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCL20P78556 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
CCL20P78556 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL20P78556 AC116562.2-201ENST00000507042 360 ntBASIC13.31□□□□□ -0.28
CCL20P78556 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL20P78556 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL20P78556 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL20P78556 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.31□□□□□ -0.28
CCL20P78556 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL20P78556 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL20P78556 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCL20P78556 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 TUBB8P12-201ENST00000308911 1335 ntBASIC13.31□□□□□ -0.28
CCL20P78556 TUBB7P-202ENST00000428444 1305 ntBASIC13.31□□□□□ -0.28
CCL20P78556 TUBB8P7-204ENST00000567960 1332 ntBASIC13.31□□□□□ -0.28
CCL20P78556 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL20P78556 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.31□□□□□ -0.28
CCL20P78556 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CCL20P78556 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL20P78556 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL20P78556 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL20P78556 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL20P78556 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL20P78556 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL20P78556 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL20P78556 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CCL20P78556 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL20P78556 AC096633.1-201ENST00000422446 749 ntBASIC13.3□□□□□ -0.28
CCL20P78556 TSPY17P-201ENST00000450329 467 ntBASIC13.3□□□□□ -0.28
CCL20P78556 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 HLA-J-202ENST00000469281 1241 ntBASIC13.3□□□□□ -0.28
CCL20P78556 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL20P78556 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL20P78556 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
CCL20P78556 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCL20P78556 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CCL20P78556 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL20P78556 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL20P78556 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL20P78556 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CCL20P78556 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL20P78556 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL20P78556 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL20P78556 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL20P78556 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
CCL20P78556 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL20P78556 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL20P78556 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL20P78556 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 AC006449.6-201ENST00000612330 2296 ntBASIC13.29□□□□□ -0.28
CCL20P78556 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCL20P78556 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms