Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.84■□□□□ 0.61
ASIC1P78348 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.84■□□□□ 0.61
ASIC1P78348 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ASIC1P78348 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ASIC1P78348 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ASIC1P78348 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ASIC1P78348 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ASIC1P78348 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.84■□□□□ 0.61
ASIC1P78348 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ASIC1P78348 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
ASIC1P78348 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.84■□□□□ 0.61
ASIC1P78348 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.84■□□□□ 0.61
ASIC1P78348 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ASIC1P78348 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ASIC1P78348 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.83■□□□□ 0.61
ASIC1P78348 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ASIC1P78348 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.83■□□□□ 0.61
ASIC1P78348 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
ASIC1P78348 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.83■□□□□ 0.61
ASIC1P78348 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.83■□□□□ 0.61
ASIC1P78348 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ASIC1P78348 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ASIC1P78348 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
ASIC1P78348 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.83■□□□□ 0.6
ASIC1P78348 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.83■□□□□ 0.6
ASIC1P78348 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.83■□□□□ 0.6
ASIC1P78348 SLC25A6P2-201ENST00000497974 877 ntBASIC18.83■□□□□ 0.6
ASIC1P78348 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
ASIC1P78348 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ASIC1P78348 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.83■□□□□ 0.6
ASIC1P78348 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.83■□□□□ 0.6
ASIC1P78348 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ASIC1P78348 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.83■□□□□ 0.6
ASIC1P78348 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 MIR1199-201ENST00000621445 119 ntBASIC18.83■□□□□ 0.6
ASIC1P78348 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.83■□□□□ 0.6
ASIC1P78348 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ASIC1P78348 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.83■□□□□ 0.6
ASIC1P78348 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.83■□□□□ 0.6
ASIC1P78348 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 AP002414.3-201ENST00000589352 1468 ntBASIC18.83■□□□□ 0.6
ASIC1P78348 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.83■□□□□ 0.6
ASIC1P78348 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.83■□□□□ 0.6
ASIC1P78348 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ASIC1P78348 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
ASIC1P78348 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.82■□□□□ 0.6
ASIC1P78348 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ASIC1P78348 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.82■□□□□ 0.6
ASIC1P78348 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.82■□□□□ 0.6
ASIC1P78348 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.82■□□□□ 0.6
ASIC1P78348 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.82■□□□□ 0.6
ASIC1P78348 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.82■□□□□ 0.6
ASIC1P78348 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.82■□□□□ 0.6
ASIC1P78348 AC105339.3-201ENST00000560043 636 ntBASIC18.82■□□□□ 0.6
ASIC1P78348 AC012640.2-201ENST00000561606 901 ntBASIC18.82■□□□□ 0.6
ASIC1P78348 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.82■□□□□ 0.6
ASIC1P78348 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.82■□□□□ 0.6
ASIC1P78348 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.82■□□□□ 0.6
ASIC1P78348 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ASIC1P78348 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.82■□□□□ 0.6
ASIC1P78348 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.82■□□□□ 0.6
ASIC1P78348 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
ASIC1P78348 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ASIC1P78348 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.82■□□□□ 0.6
ASIC1P78348 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.82■□□□□ 0.6
ASIC1P78348 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
ASIC1P78348 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ASIC1P78348 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.82■□□□□ 0.6
ASIC1P78348 AC006277.1-201ENST00000624348 1610 ntBASIC18.82■□□□□ 0.6
ASIC1P78348 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.81■□□□□ 0.6
ASIC1P78348 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms