Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
TPM4P67936 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TPM4P67936 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.97■□□□□ 0.63
TPM4P67936 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM4P67936 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM4P67936 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TPM4P67936 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
TPM4P67936 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM4P67936 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TPM4P67936 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.96■□□□□ 0.63
TPM4P67936 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TPM4P67936 AL137013.1-201ENST00000432946 1228 ntBASIC18.96■□□□□ 0.63
TPM4P67936 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM4P67936 HLA-J-202ENST00000469281 1241 ntBASIC18.96■□□□□ 0.63
TPM4P67936 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.96■□□□□ 0.63
TPM4P67936 AC011840.4-201ENST00000578471 627 ntBASIC18.96■□□□□ 0.63
TPM4P67936 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM4P67936 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 AC006538.1-201ENST00000567905 1585 ntBASIC18.96■□□□□ 0.63
TPM4P67936 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM4P67936 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM4P67936 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.96■□□□□ 0.63
TPM4P67936 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM4P67936 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM4P67936 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.96■□□□□ 0.63
TPM4P67936 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TPM4P67936 AL021920.2-201ENST00000624828 1351 ntBASIC18.95■□□□□ 0.62
TPM4P67936 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.95■□□□□ 0.62
TPM4P67936 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.95■□□□□ 0.62
TPM4P67936 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.95■□□□□ 0.62
TPM4P67936 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
TPM4P67936 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM4P67936 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM4P67936 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.95■□□□□ 0.62
TPM4P67936 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.95■□□□□ 0.62
TPM4P67936 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.95■□□□□ 0.62
TPM4P67936 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.95■□□□□ 0.62
TPM4P67936 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.95■□□□□ 0.62
TPM4P67936 AC124864.1-201ENST00000623408 392 ntBASIC18.95■□□□□ 0.62
TPM4P67936 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TPM4P67936 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM4P67936 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM4P67936 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
TPM4P67936 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.95■□□□□ 0.62
TPM4P67936 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM4P67936 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM4P67936 LINC00554-201ENST00000564841 3011 ntBASIC18.95■□□□□ 0.62
TPM4P67936 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms