Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 OR7E14P-202ENST00000530490 1290 ntBASIC15.24■□□□□ 0.03
RPS4XP62701 SART3-203ENST00000546611 1184 ntBASIC15.24■□□□□ 0.03
RPS4XP62701 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.24■□□□□ 0.03
RPS4XP62701 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.24■□□□□ 0.03
RPS4XP62701 AC021087.4-201ENST00000563761 564 ntBASIC15.24■□□□□ 0.03
RPS4XP62701 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.24■□□□□ 0.03
RPS4XP62701 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RPS4XP62701 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.24■□□□□ 0.03
RPS4XP62701 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RPS4XP62701 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RPS4XP62701 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
RPS4XP62701 TOP3BP1-201ENST00000420768 1380 ntBASIC15.24■□□□□ 0.03
RPS4XP62701 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS4XP62701 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS4XP62701 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 DOC2GP-204ENST00000639052 2548 ntBASIC15.23■□□□□ 0.03
RPS4XP62701 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS4XP62701 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS4XP62701 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS4XP62701 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS4XP62701 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RPS4XP62701 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS4XP62701 RPS2P1-201ENST00000434010 821 ntBASIC15.23■□□□□ 0.03
RPS4XP62701 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS4XP62701 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS4XP62701 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 AC004706.3-202ENST00000621574 984 ntBASIC15.23■□□□□ 0.03
RPS4XP62701 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS4XP62701 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS4XP62701 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.03
RPS4XP62701 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RPS4XP62701 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RPS4XP62701 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS4XP62701 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS4XP62701 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RPS4XP62701 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4XP62701 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RPS4XP62701 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RPS4XP62701 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS4XP62701 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 CYP2T1P-202ENST00000641596 2535 ntBASIC15.22■□□□□ 0.03
RPS4XP62701 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RPS4XP62701 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4XP62701 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RPS4XP62701 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4XP62701 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS4XP62701 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.22■□□□□ 0.03
RPS4XP62701 BX842568.4-201ENST00000421222 227 ntBASIC15.22■□□□□ 0.03
RPS4XP62701 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.22■□□□□ 0.03
RPS4XP62701 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS4XP62701 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.22■□□□□ 0.03
RPS4XP62701 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.22■□□□□ 0.03
RPS4XP62701 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4XP62701 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS4XP62701 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4XP62701 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4XP62701 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4XP62701 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.22■□□□□ 0.03
RPS4XP62701 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4XP62701 MTDHP4-201ENST00000600287 670 ntBASIC15.22■□□□□ 0.03
RPS4XP62701 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4XP62701 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS4XP62701 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.22■□□□□ 0.03
RPS4XP62701 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS4XP62701 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RPS4XP62701 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms