Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
SEC61A1P61619 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SEC61A1P61619 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.84□□□□□ -0.03
SEC61A1P61619 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.84□□□□□ -0.03
SEC61A1P61619 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SEC61A1P61619 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.84□□□□□ -0.03
SEC61A1P61619 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.84□□□□□ -0.03
SEC61A1P61619 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 AC009078.2-202ENST00000463353 338 ntBASIC14.84□□□□□ -0.03
SEC61A1P61619 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.84□□□□□ -0.03
SEC61A1P61619 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.84□□□□□ -0.03
SEC61A1P61619 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
SEC61A1P61619 AF238378.1-201ENST00000526806 358 ntBASIC14.84□□□□□ -0.03
SEC61A1P61619 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SEC61A1P61619 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.84□□□□□ -0.03
SEC61A1P61619 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
SEC61A1P61619 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.84□□□□□ -0.03
SEC61A1P61619 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.84□□□□□ -0.03
SEC61A1P61619 REXO1L6P-202ENST00000619970 1078 ntBASIC14.84□□□□□ -0.03
SEC61A1P61619 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SEC61A1P61619 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SEC61A1P61619 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SEC61A1P61619 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.84□□□□□ -0.03
SEC61A1P61619 KRT8P47-201ENST00000604727 1398 ntBASIC14.84□□□□□ -0.03
SEC61A1P61619 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.83□□□□□ -0.03
SEC61A1P61619 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.83□□□□□ -0.03
SEC61A1P61619 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SEC61A1P61619 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SEC61A1P61619 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SEC61A1P61619 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SEC61A1P61619 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SEC61A1P61619 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SEC61A1P61619 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.83□□□□□ -0.04
SEC61A1P61619 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.83□□□□□ -0.04
SEC61A1P61619 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.83□□□□□ -0.04
SEC61A1P61619 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.83□□□□□ -0.04
SEC61A1P61619 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SEC61A1P61619 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.83□□□□□ -0.04
SEC61A1P61619 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.83□□□□□ -0.04
SEC61A1P61619 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
SEC61A1P61619 DDX43P3-201ENST00000441064 443 ntBASIC14.83□□□□□ -0.04
SEC61A1P61619 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.83□□□□□ -0.04
SEC61A1P61619 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.83□□□□□ -0.04
SEC61A1P61619 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.83□□□□□ -0.04
SEC61A1P61619 AC009533.2-201ENST00000543664 586 ntBASIC14.83□□□□□ -0.04
SEC61A1P61619 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.83□□□□□ -0.04
SEC61A1P61619 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.83□□□□□ -0.04
SEC61A1P61619 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SEC61A1P61619 AC104692.2-201ENST00000603054 253 ntBASIC14.83□□□□□ -0.04
SEC61A1P61619 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SEC61A1P61619 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.83□□□□□ -0.04
SEC61A1P61619 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.83□□□□□ -0.04
SEC61A1P61619 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SEC61A1P61619 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.83□□□□□ -0.04
SEC61A1P61619 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
SEC61A1P61619 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms