Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S2P59780 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S2P59780 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S2P59780 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.55□□□□□ -0.08
AP3S2P59780 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S2P59780 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S2P59780 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S2P59780 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.55□□□□□ -0.08
AP3S2P59780 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.55□□□□□ -0.08
AP3S2P59780 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S2P59780 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S2P59780 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S2P59780 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.55□□□□□ -0.08
AP3S2P59780 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S2P59780 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.54□□□□□ -0.08
AP3S2P59780 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.54□□□□□ -0.08
AP3S2P59780 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.54□□□□□ -0.08
AP3S2P59780 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.54□□□□□ -0.08
AP3S2P59780 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.54□□□□□ -0.08
AP3S2P59780 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.54□□□□□ -0.08
AP3S2P59780 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.54□□□□□ -0.08
AP3S2P59780 C1QBPP2-201ENST00000528754 825 ntBASIC14.54□□□□□ -0.08
AP3S2P59780 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.54□□□□□ -0.08
AP3S2P59780 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.54□□□□□ -0.08
AP3S2P59780 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
AP3S2P59780 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
AP3S2P59780 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.54□□□□□ -0.08
AP3S2P59780 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.54□□□□□ -0.08
AP3S2P59780 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.54□□□□□ -0.08
AP3S2P59780 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
AP3S2P59780 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
AP3S2P59780 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
AP3S2P59780 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.54□□□□□ -0.08
AP3S2P59780 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.54□□□□□ -0.08
AP3S2P59780 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.54□□□□□ -0.08
AP3S2P59780 AL603832.2-201ENST00000566195 2125 ntBASIC14.54□□□□□ -0.08
AP3S2P59780 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S2P59780 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.54□□□□□ -0.08
AP3S2P59780 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
AP3S2P59780 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.54□□□□□ -0.08
AP3S2P59780 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
AP3S2P59780 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
AP3S2P59780 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.53□□□□□ -0.08
AP3S2P59780 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.53□□□□□ -0.08
AP3S2P59780 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.53□□□□□ -0.08
AP3S2P59780 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
AP3S2P59780 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.53□□□□□ -0.08
AP3S2P59780 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S2P59780 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
AP3S2P59780 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
AP3S2P59780 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S2P59780 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
AP3S2P59780 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.53□□□□□ -0.08
AP3S2P59780 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S2P59780 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 AL355802.2-201ENST00000402069 882 ntBASIC14.53□□□□□ -0.08
AP3S2P59780 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.53□□□□□ -0.08
AP3S2P59780 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S2P59780 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
AP3S2P59780 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.53□□□□□ -0.08
AP3S2P59780 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
AP3S2P59780 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.53□□□□□ -0.08
AP3S2P59780 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S2P59780 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S2P59780 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms