Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.76■□□□□ 0.75
RHBDL3P58872 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.76■□□□□ 0.75
RHBDL3P58872 RN7SL204P-201ENST00000582831 262 ntBASIC19.76■□□□□ 0.75
RHBDL3P58872 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.76■□□□□ 0.75
RHBDL3P58872 AC007967.4-201ENST00000614700 386 ntBASIC19.76■□□□□ 0.75
RHBDL3P58872 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDL3P58872 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDL3P58872 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RHBDL3P58872 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDL3P58872 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDL3P58872 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDL3P58872 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.76■□□□□ 0.75
RHBDL3P58872 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.76■□□□□ 0.75
RHBDL3P58872 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.76■□□□□ 0.75
RHBDL3P58872 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDL3P58872 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RHBDL3P58872 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.76■□□□□ 0.75
RHBDL3P58872 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
RHBDL3P58872 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.75■□□□□ 0.75
RHBDL3P58872 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.75■□□□□ 0.75
RHBDL3P58872 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.75■□□□□ 0.75
RHBDL3P58872 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RHBDL3P58872 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.75■□□□□ 0.75
RHBDL3P58872 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.75■□□□□ 0.75
RHBDL3P58872 AC002472.2-201ENST00000442739 958 ntBASIC19.75■□□□□ 0.75
RHBDL3P58872 COX20P2-201ENST00000452636 358 ntBASIC19.75■□□□□ 0.75
RHBDL3P58872 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 IGHV3-42-201ENST00000520410 361 ntBASIC19.75■□□□□ 0.75
RHBDL3P58872 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.75■□□□□ 0.75
RHBDL3P58872 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.75■□□□□ 0.75
RHBDL3P58872 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.75■□□□□ 0.75
RHBDL3P58872 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RHBDL3P58872 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.75■□□□□ 0.75
RHBDL3P58872 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
RHBDL3P58872 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.75■□□□□ 0.75
RHBDL3P58872 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.75■□□□□ 0.75
RHBDL3P58872 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDL3P58872 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.74■□□□□ 0.75
RHBDL3P58872 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 FAM220BP-201ENST00000377689 816 ntBASIC19.74■□□□□ 0.75
RHBDL3P58872 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 AC236430.1-201ENST00000402231 743 ntBASIC19.74■□□□□ 0.75
RHBDL3P58872 TSSK5P-201ENST00000423978 907 ntBASIC19.74■□□□□ 0.75
RHBDL3P58872 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.74■□□□□ 0.75
RHBDL3P58872 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.74■□□□□ 0.75
RHBDL3P58872 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.74■□□□□ 0.75
RHBDL3P58872 TSPY16P-201ENST00000449843 468 ntBASIC19.74■□□□□ 0.75
RHBDL3P58872 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 AC004890.2-204ENST00000481968 304 ntBASIC19.74■□□□□ 0.75
RHBDL3P58872 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.74■□□□□ 0.75
RHBDL3P58872 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.74■□□□□ 0.75
RHBDL3P58872 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.74■□□□□ 0.75
RHBDL3P58872 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.74■□□□□ 0.75
RHBDL3P58872 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.74■□□□□ 0.75
RHBDL3P58872 SPTSSB-204ENST00000617024 1292 ntBASIC19.74■□□□□ 0.75
RHBDL3P58872 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RHBDL3P58872 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RHBDL3P58872 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.74■□□□□ 0.75
RHBDL3P58872 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDL3P58872 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.73■□□□□ 0.75
RHBDL3P58872 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RHBDL3P58872 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDL3P58872 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RHBDL3P58872 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDL3P58872 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDL3P58872 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.73■□□□□ 0.75
RHBDL3P58872 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDL3P58872 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RHBDL3P58872 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.73■□□□□ 0.75
RHBDL3P58872 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDL3P58872 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDL3P58872 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms