Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H2P55055 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H2P55055 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H2P55055 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 FAM45BP-202ENST00000592932 1624 ntBASIC16.06■□□□□ 0.16
NR1H2P55055 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H2P55055 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H2P55055 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.06■□□□□ 0.16
NR1H2P55055 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.06■□□□□ 0.16
NR1H2P55055 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NR1H2P55055 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H2P55055 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.06■□□□□ 0.16
NR1H2P55055 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.06■□□□□ 0.16
NR1H2P55055 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H2P55055 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.06■□□□□ 0.16
NR1H2P55055 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.06■□□□□ 0.16
NR1H2P55055 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
NR1H2P55055 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H2P55055 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H2P55055 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.06■□□□□ 0.16
NR1H2P55055 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.06■□□□□ 0.16
NR1H2P55055 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NR1H2P55055 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.06■□□□□ 0.16
NR1H2P55055 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.06■□□□□ 0.16
NR1H2P55055 AC079602.3-201ENST00000623931 403 ntBASIC16.06■□□□□ 0.16
NR1H2P55055 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.06■□□□□ 0.16
NR1H2P55055 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NR1H2P55055 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NR1H2P55055 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NR1H2P55055 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.06■□□□□ 0.16
NR1H2P55055 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.06■□□□□ 0.16
NR1H2P55055 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 AC132938.6-201ENST00000623828 1655 ntBASIC16.05■□□□□ 0.16
NR1H2P55055 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NR1H2P55055 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NR1H2P55055 AC016734.2-201ENST00000624325 1377 ntBASIC16.05■□□□□ 0.16
NR1H2P55055 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.05■□□□□ 0.16
NR1H2P55055 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.05■□□□□ 0.16
NR1H2P55055 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NR1H2P55055 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.05■□□□□ 0.16
NR1H2P55055 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 CHCHD2P8-201ENST00000429873 447 ntBASIC16.05■□□□□ 0.16
NR1H2P55055 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.05■□□□□ 0.16
NR1H2P55055 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
NR1H2P55055 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.05■□□□□ 0.16
NR1H2P55055 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.05■□□□□ 0.16
NR1H2P55055 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.05■□□□□ 0.16
NR1H2P55055 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NR1H2P55055 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.05■□□□□ 0.16
NR1H2P55055 AC092053.1-201ENST00000605787 1936 ntBASIC16.05■□□□□ 0.16
NR1H2P55055 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.05■□□□□ 0.16
NR1H2P55055 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NR1H2P55055 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NR1H2P55055 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H2P55055 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms