Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTPN5P54829 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTPN5P54829 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN5P54829 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PTPN5P54829 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTPN5P54829 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN5P54829 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPN5P54829 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN5P54829 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PTPN5P54829 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN5P54829 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PTPN5P54829 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPN5P54829 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.4■□□□□ 0.38
PTPN5P54829 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN5P54829 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPN5P54829 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN5P54829 MIR4525-201ENST00000580000 75 ntBASIC17.4■□□□□ 0.38
PTPN5P54829 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN5P54829 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PTPN5P54829 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN5P54829 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PTPN5P54829 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PTPN5P54829 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PTPN5P54829 AC046185.3-201ENST00000623228 1824 ntBASIC17.4■□□□□ 0.38
PTPN5P54829 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN5P54829 AC106820.2-201ENST00000563775 3264 ntBASIC17.39■□□□□ 0.38
PTPN5P54829 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN5P54829 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPN5P54829 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PTPN5P54829 AC004945.1-201ENST00000416738 983 ntBASIC17.39■□□□□ 0.37
PTPN5P54829 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
PTPN5P54829 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.39■□□□□ 0.37
PTPN5P54829 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.39■□□□□ 0.37
PTPN5P54829 FAM8A2P-201ENST00000528813 1142 ntBASIC17.39■□□□□ 0.37
PTPN5P54829 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.39■□□□□ 0.37
PTPN5P54829 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC17.39■□□□□ 0.37
PTPN5P54829 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.39■□□□□ 0.37
PTPN5P54829 AL162274.1-201ENST00000617191 1098 ntBASIC17.39■□□□□ 0.37
PTPN5P54829 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PTPN5P54829 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPN5P54829 AC068587.10-201ENST00000641210 219 ntBASIC17.39■□□□□ 0.37
PTPN5P54829 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN5P54829 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PTPN5P54829 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTPN5P54829 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN5P54829 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN5P54829 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN5P54829 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN5P54829 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN5P54829 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN5P54829 PI4KAP1-204ENST00000612579 1703 ntBASIC17.38■□□□□ 0.37
PTPN5P54829 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
PTPN5P54829 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN5P54829 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN5P54829 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN5P54829 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.38■□□□□ 0.37
PTPN5P54829 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN5P54829 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN5P54829 AC098614.1-201ENST00000368528 745 ntBASIC17.38■□□□□ 0.37
PTPN5P54829 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN5P54829 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms