Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
EPHA4P54764 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.21■□□□□ 0.19
EPHA4P54764 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.21■□□□□ 0.19
EPHA4P54764 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
EPHA4P54764 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
EPHA4P54764 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
EPHA4P54764 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
EPHA4P54764 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.2■□□□□ 0.18
EPHA4P54764 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
EPHA4P54764 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
EPHA4P54764 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.2■□□□□ 0.18
EPHA4P54764 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.2■□□□□ 0.18
EPHA4P54764 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.2■□□□□ 0.18
EPHA4P54764 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
EPHA4P54764 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
EPHA4P54764 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.2■□□□□ 0.18
EPHA4P54764 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
EPHA4P54764 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.2■□□□□ 0.18
EPHA4P54764 HMGN1P19-201ENST00000436976 333 ntBASIC16.2■□□□□ 0.18
EPHA4P54764 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
EPHA4P54764 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.2■□□□□ 0.18
EPHA4P54764 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.2■□□□□ 0.18
EPHA4P54764 AC093520.2-201ENST00000561830 333 ntBASIC16.2■□□□□ 0.18
EPHA4P54764 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.2■□□□□ 0.18
EPHA4P54764 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
EPHA4P54764 AC021097.1-201ENST00000607902 574 ntBASIC16.2■□□□□ 0.18
EPHA4P54764 LINC00896-202ENST00000609602 2128 ntBASIC16.2■□□□□ 0.18
EPHA4P54764 AC093028.1-201ENST00000622998 982 ntBASIC16.2■□□□□ 0.18
EPHA4P54764 LINC00628-201ENST00000628516 1289 ntBASIC16.2■□□□□ 0.18
EPHA4P54764 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.2■□□□□ 0.18
EPHA4P54764 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.2■□□□□ 0.18
EPHA4P54764 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
EPHA4P54764 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
EPHA4P54764 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
EPHA4P54764 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.2■□□□□ 0.18
EPHA4P54764 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA4P54764 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
EPHA4P54764 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
EPHA4P54764 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.19■□□□□ 0.18
EPHA4P54764 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
EPHA4P54764 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.19■□□□□ 0.18
EPHA4P54764 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
EPHA4P54764 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.19■□□□□ 0.18
EPHA4P54764 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.19■□□□□ 0.18
EPHA4P54764 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
EPHA4P54764 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
EPHA4P54764 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
EPHA4P54764 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.19■□□□□ 0.18
EPHA4P54764 KRT18P32-201ENST00000424695 1287 ntBASIC16.19■□□□□ 0.18
EPHA4P54764 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.19■□□□□ 0.18
EPHA4P54764 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 IGHV3-62-201ENST00000520057 340 ntBASIC16.19■□□□□ 0.18
EPHA4P54764 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.19■□□□□ 0.18
EPHA4P54764 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.19■□□□□ 0.18
EPHA4P54764 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
EPHA4P54764 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.19■□□□□ 0.18
EPHA4P54764 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
EPHA4P54764 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EPHA4P54764 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
EPHA4P54764 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.19■□□□□ 0.18
EPHA4P54764 AC108860.2-201ENST00000562760 2183 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms