Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
NUBP1P53384 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
NUBP1P53384 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.77■□□□□ 0.28
NUBP1P53384 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.77■□□□□ 0.28
NUBP1P53384 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.77■□□□□ 0.28
NUBP1P53384 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.77■□□□□ 0.28
NUBP1P53384 AC009245.1-201ENST00000456481 862 ntBASIC16.77■□□□□ 0.28
NUBP1P53384 KRT18P34-201ENST00000488218 1270 ntBASIC16.77■□□□□ 0.28
NUBP1P53384 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.77■□□□□ 0.28
NUBP1P53384 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.77■□□□□ 0.28
NUBP1P53384 AL079307.3-201ENST00000556114 283 ntBASIC16.77■□□□□ 0.28
NUBP1P53384 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.77■□□□□ 0.28
NUBP1P53384 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.77■□□□□ 0.28
NUBP1P53384 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.77■□□□□ 0.28
NUBP1P53384 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.77■□□□□ 0.28
NUBP1P53384 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NUBP1P53384 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NUBP1P53384 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.77■□□□□ 0.28
NUBP1P53384 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.77■□□□□ 0.28
NUBP1P53384 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
NUBP1P53384 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NUBP1P53384 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NUBP1P53384 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.77■□□□□ 0.27
NUBP1P53384 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
NUBP1P53384 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.77■□□□□ 0.27
NUBP1P53384 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.77■□□□□ 0.27
NUBP1P53384 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NUBP1P53384 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.76■□□□□ 0.27
NUBP1P53384 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.76■□□□□ 0.27
NUBP1P53384 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.76■□□□□ 0.27
NUBP1P53384 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.76■□□□□ 0.27
NUBP1P53384 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.76■□□□□ 0.27
NUBP1P53384 BTBD7P2-201ENST00000441962 620 ntBASIC16.76■□□□□ 0.27
NUBP1P53384 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC16.76■□□□□ 0.27
NUBP1P53384 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.76■□□□□ 0.27
NUBP1P53384 RNA5SP412-201ENST00000516234 123 ntBASIC16.76■□□□□ 0.27
NUBP1P53384 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.76■□□□□ 0.27
NUBP1P53384 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
NUBP1P53384 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.76■□□□□ 0.27
NUBP1P53384 SNX29P1-201ENST00000548357 1007 ntBASIC16.76■□□□□ 0.27
NUBP1P53384 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.76■□□□□ 0.27
NUBP1P53384 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.76■□□□□ 0.27
NUBP1P53384 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.76■□□□□ 0.27
NUBP1P53384 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.76■□□□□ 0.27
NUBP1P53384 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.76■□□□□ 0.27
NUBP1P53384 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.76■□□□□ 0.27
NUBP1P53384 AC244093.1-201ENST00000610837 814 ntBASIC16.76■□□□□ 0.27
NUBP1P53384 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NUBP1P53384 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.76■□□□□ 0.27
NUBP1P53384 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.76■□□□□ 0.27
NUBP1P53384 AC011270.2-201ENST00000624293 2550 ntBASIC16.76■□□□□ 0.27
NUBP1P53384 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
NUBP1P53384 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NUBP1P53384 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.75■□□□□ 0.27
NUBP1P53384 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.75■□□□□ 0.27
NUBP1P53384 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.75■□□□□ 0.27
NUBP1P53384 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.75■□□□□ 0.27
NUBP1P53384 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.75■□□□□ 0.27
NUBP1P53384 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NUBP1P53384 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.75■□□□□ 0.27
NUBP1P53384 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.75■□□□□ 0.27
NUBP1P53384 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 AL080243.2-201ENST00000418783 582 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms