Protein–RNA interactions for Protein: P48163

ME1, NADP-dependent malic enzyme, humanhuman

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME1P48163 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ME1P48163 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.35■□□□□ 0.69
ME1P48163 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ME1P48163 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ME1P48163 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ME1P48163 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ME1P48163 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ME1P48163 KRT16P4-201ENST00000453883 522 ntBASIC19.35■□□□□ 0.69
ME1P48163 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.35■□□□□ 0.69
ME1P48163 KRT18P35-201ENST00000510488 1269 ntBASIC19.35■□□□□ 0.69
ME1P48163 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.35■□□□□ 0.69
ME1P48163 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.35■□□□□ 0.69
ME1P48163 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.35■□□□□ 0.69
ME1P48163 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.35■□□□□ 0.69
ME1P48163 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.35■□□□□ 0.69
ME1P48163 AC093458.2-201ENST00000623150 629 ntBASIC19.35■□□□□ 0.69
ME1P48163 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.35■□□□□ 0.69
ME1P48163 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ME1P48163 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ME1P48163 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.35■□□□□ 0.69
ME1P48163 AL391005.1-201ENST00000623953 2435 ntBASIC19.35■□□□□ 0.69
ME1P48163 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ME1P48163 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ME1P48163 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.35■□□□□ 0.69
ME1P48163 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ME1P48163 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ME1P48163 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ME1P48163 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
ME1P48163 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ME1P48163 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ME1P48163 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ME1P48163 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ME1P48163 AL590787.1-201ENST00000568856 1315 ntBASIC19.34■□□□□ 0.69
ME1P48163 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ME1P48163 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ME1P48163 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
ME1P48163 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
ME1P48163 LINC00895-201ENST00000629028 1637 ntBASIC19.34■□□□□ 0.69
ME1P48163 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.34■□□□□ 0.69
ME1P48163 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ME1P48163 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ME1P48163 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ME1P48163 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.34■□□□□ 0.69
ME1P48163 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.34■□□□□ 0.69
ME1P48163 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.34■□□□□ 0.69
ME1P48163 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ME1P48163 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.34■□□□□ 0.69
ME1P48163 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ME1P48163 AL353135.1-201ENST00000606729 504 ntBASIC19.34■□□□□ 0.69
ME1P48163 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ME1P48163 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
ME1P48163 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.34■□□□□ 0.69
ME1P48163 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.34■□□□□ 0.69
ME1P48163 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ME1P48163 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ME1P48163 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ME1P48163 KRT8P49-201ENST00000604166 1432 ntBASIC19.34■□□□□ 0.69
ME1P48163 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ME1P48163 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ME1P48163 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
ME1P48163 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.33■□□□□ 0.69
ME1P48163 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ME1P48163 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ME1P48163 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ME1P48163 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ME1P48163 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.33■□□□□ 0.69
ME1P48163 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ME1P48163 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ME1P48163 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
ME1P48163 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ME1P48163 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.33■□□□□ 0.68
ME1P48163 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.33■□□□□ 0.68
ME1P48163 AC064862.7-201ENST00000604520 867 ntBASIC19.33■□□□□ 0.68
ME1P48163 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ME1P48163 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.33■□□□□ 0.68
ME1P48163 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ME1P48163 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ME1P48163 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ME1P48163 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.33■□□□□ 0.68
ME1P48163 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ME1P48163 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.33■□□□□ 0.68
ME1P48163 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ME1P48163 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ME1P48163 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ME1P48163 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ME1P48163 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.33■□□□□ 0.68
ME1P48163 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ME1P48163 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ME1P48163 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.33■□□□□ 0.68
ME1P48163 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ME1P48163 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ME1P48163 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ME1P48163 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ME1P48163 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
ME1P48163 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ME1P48163 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.32■□□□□ 0.68
ME1P48163 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
ME1P48163 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ME1P48163 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ME1P48163 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms