Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.97■□□□□ 0.31
MDH1P40925 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
MDH1P40925 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.97■□□□□ 0.31
MDH1P40925 AC138035.3-201ENST00000622706 2791 ntBASIC16.97■□□□□ 0.31
MDH1P40925 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.97■□□□□ 0.31
MDH1P40925 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MDH1P40925 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
MDH1P40925 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.97■□□□□ 0.31
MDH1P40925 AC068472.1-201ENST00000474589 881 ntBASIC16.97■□□□□ 0.31
MDH1P40925 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.97■□□□□ 0.31
MDH1P40925 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.97■□□□□ 0.31
MDH1P40925 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.97■□□□□ 0.31
MDH1P40925 AC010653.2-201ENST00000623505 997 ntBASIC16.97■□□□□ 0.31
MDH1P40925 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MDH1P40925 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MDH1P40925 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.97■□□□□ 0.31
MDH1P40925 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.97■□□□□ 0.31
MDH1P40925 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 PRAL-201ENST00000624952 3286 ntBASIC16.97■□□□□ 0.31
MDH1P40925 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MDH1P40925 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
MDH1P40925 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
MDH1P40925 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
MDH1P40925 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MDH1P40925 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.96■□□□□ 0.31
MDH1P40925 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.96■□□□□ 0.31
MDH1P40925 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.96■□□□□ 0.31
MDH1P40925 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.96■□□□□ 0.31
MDH1P40925 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.96■□□□□ 0.31
MDH1P40925 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.96■□□□□ 0.31
MDH1P40925 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.96■□□□□ 0.31
MDH1P40925 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MDH1P40925 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
MDH1P40925 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
MDH1P40925 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.96■□□□□ 0.3
MDH1P40925 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.96■□□□□ 0.3
MDH1P40925 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
MDH1P40925 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.96■□□□□ 0.3
MDH1P40925 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.96■□□□□ 0.3
MDH1P40925 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MDH1P40925 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MDH1P40925 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MDH1P40925 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.95■□□□□ 0.3
MDH1P40925 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
MDH1P40925 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.95■□□□□ 0.3
MDH1P40925 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
MDH1P40925 GGT3P-204ENST00000453783 1664 ntBASIC16.95■□□□□ 0.3
MDH1P40925 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.95■□□□□ 0.3
MDH1P40925 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.95■□□□□ 0.3
MDH1P40925 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MDH1P40925 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.95■□□□□ 0.3
MDH1P40925 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.95■□□□□ 0.3
MDH1P40925 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.95■□□□□ 0.3
MDH1P40925 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.95■□□□□ 0.3
MDH1P40925 KRT18P6-201ENST00000555540 1265 ntBASIC16.95■□□□□ 0.3
MDH1P40925 DUX4L17-201ENST00000557360 1267 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms