Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.31■□□□□ 0.84
CHMLP26374 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHMLP26374 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHMLP26374 GGT3P-204ENST00000453783 1664 ntBASIC20.31■□□□□ 0.84
CHMLP26374 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMLP26374 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMLP26374 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMLP26374 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMLP26374 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMLP26374 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMLP26374 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CHMLP26374 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CHMLP26374 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMLP26374 GGT4P-201ENST00000623672 1708 ntBASIC20.3■□□□□ 0.84
CHMLP26374 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.3■□□□□ 0.84
CHMLP26374 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMLP26374 AC018695.7-201ENST00000624587 2492 ntBASIC20.3■□□□□ 0.84
CHMLP26374 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.3■□□□□ 0.84
CHMLP26374 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMLP26374 AL031731.1-201ENST00000642131 2094 ntBASIC20.3■□□□□ 0.84
CHMLP26374 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.3■□□□□ 0.84
CHMLP26374 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMLP26374 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.3■□□□□ 0.84
CHMLP26374 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.3■□□□□ 0.84
CHMLP26374 MRPL20P1-201ENST00000400819 433 ntBASIC20.3■□□□□ 0.84
CHMLP26374 AC009078.2-202ENST00000463353 338 ntBASIC20.3■□□□□ 0.84
CHMLP26374 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
CHMLP26374 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.3■□□□□ 0.84
CHMLP26374 AC005412.3-201ENST00000580309 715 ntBASIC20.3■□□□□ 0.84
CHMLP26374 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.3■□□□□ 0.84
CHMLP26374 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CHMLP26374 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.3■□□□□ 0.84
CHMLP26374 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.3■□□□□ 0.84
CHMLP26374 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
CHMLP26374 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMLP26374 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMLP26374 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CHMLP26374 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.3■□□□□ 0.84
CHMLP26374 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMLP26374 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CHMLP26374 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMLP26374 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMLP26374 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.3■□□□□ 0.84
CHMLP26374 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMLP26374 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.29■□□□□ 0.84
CHMLP26374 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMLP26374 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CHMLP26374 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMLP26374 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.29■□□□□ 0.84
CHMLP26374 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 AC098831.1-202ENST00000438821 336 ntBASIC20.29■□□□□ 0.84
CHMLP26374 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHMLP26374 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHMLP26374 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CHMLP26374 ACTL9-202ENST00000612068 1252 ntBASIC20.29■□□□□ 0.84
CHMLP26374 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.29■□□□□ 0.84
CHMLP26374 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CHMLP26374 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHMLP26374 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMLP26374 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMLP26374 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHMLP26374 DOC2GP-204ENST00000639052 2548 ntBASIC20.28■□□□□ 0.84
CHMLP26374 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.28■□□□□ 0.84
CHMLP26374 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.28■□□□□ 0.84
CHMLP26374 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHMLP26374 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.28■□□□□ 0.84
CHMLP26374 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.28■□□□□ 0.84
CHMLP26374 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHMLP26374 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMLP26374 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.28■□□□□ 0.84
CHMLP26374 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.27■□□□□ 0.84
CHMLP26374 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMLP26374 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMLP26374 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms