Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LMO1P25800 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.19□□□□□ -0.14
LMO1P25800 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.19□□□□□ -0.14
LMO1P25800 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 AC008741.2-201ENST00000612792 3115 ntBASIC14.19□□□□□ -0.14
LMO1P25800 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
LMO1P25800 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LMO1P25800 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO1P25800 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO1P25800 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO1P25800 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
LMO1P25800 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO1P25800 AC012313.10-201ENST00000623509 926 ntBASIC14.18□□□□□ -0.14
LMO1P25800 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LMO1P25800 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 AL513523.2-202ENST00000427283 2040 ntBASIC14.18□□□□□ -0.14
LMO1P25800 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LMO1P25800 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO1P25800 AC006277.1-201ENST00000624348 1610 ntBASIC14.18□□□□□ -0.14
LMO1P25800 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO1P25800 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO1P25800 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO1P25800 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LMO1P25800 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.17□□□□□ -0.14
LMO1P25800 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO1P25800 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO1P25800 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.17□□□□□ -0.14
LMO1P25800 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
LMO1P25800 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 KRT18P27-201ENST00000427733 1299 ntBASIC14.17□□□□□ -0.14
LMO1P25800 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO1P25800 UNC93B7-201ENST00000509439 705 ntBASIC14.17□□□□□ -0.14
LMO1P25800 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.17□□□□□ -0.14
LMO1P25800 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.17□□□□□ -0.14
LMO1P25800 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.17□□□□□ -0.14
LMO1P25800 REXO1L3P-201ENST00000622202 1288 ntBASIC14.17□□□□□ -0.14
LMO1P25800 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.17□□□□□ -0.14
LMO1P25800 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO1P25800 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LMO1P25800 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LMO1P25800 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LMO1P25800 AC006504.4-201ENST00000592118 1568 ntBASIC14.17□□□□□ -0.14
LMO1P25800 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.17□□□□□ -0.14
LMO1P25800 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO1P25800 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms