Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 GSPT1-205ENST00000562794 501 ntTSL 34.35□□□□□ -1.712e-6■■□□□ 14.2
RPS3P23396 GSPT1-207ENST00000564790 491 ntTSL 33.39□□□□□ -1.872e-6■■□□□ 14.2
RPS3P23396 SSR3-205ENST00000467789 1039 ntTSL 2 BASIC10.02□□□□□ -0.816e-11■■□□□ 14.2
RPS3P23396 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.956e-11■■□□□ 14.2
RPS3P23396 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.97□□□□□ -1.616e-11■■□□□ 14.2
RPS3P23396 FBLN1-210ENST00000450975 459 ntTSL 420.32■□□□□ 0.843e-13■■□□□ 14.2
RPS3P23396 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.34□□□□□ -0.115e-6■■□□□ 14.2
RPS3P23396 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.525e-6■■□□□ 14.2
RPS3P23396 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.99■□□□□ 0.953e-9■■□□□ 14.2
RPS3P23396 POFUT1-205ENST00000486717 959 ntTSL 216■□□□□ 0.153e-9■■□□□ 14.2
RPS3P23396 LRRC61-204ENST00000471872 653 ntTSL 414.18□□□□□ -0.149e-10■■□□□ 14.2
RPS3P23396 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.56□□□□□ -0.247e-7■■□□□ 14.2
RPS3P23396 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.63□□□□□ -0.397e-7■■□□□ 14.2
RPS3P23396 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.97e-7■■□□□ 14.2
RPS3P23396 EXT2-205ENST00000527014 580 ntTSL 418.85■□□□□ 0.612e-6■■□□□ 14.2
RPS3P23396 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.48■■□□□ 1.996e-8■■□□□ 14.2
RPS3P23396 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.46e-8■■□□□ 14.2
RPS3P23396 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.346e-8■■□□□ 14.2
RPS3P23396 GLB1-205ENST00000436768 558 ntTSL 322.4■■□□□ 1.183e-8■■□□□ 14.2
RPS3P23396 GRK2-207ENST00000529738 500 ntTSL 220.62■□□□□ 0.896e-8■■□□□ 14.2
RPS3P23396 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.866e-8■■□□□ 14.2
RPS3P23396 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.34■□□□□ 0.856e-8■■□□□ 14.2
RPS3P23396 PKMYT1-202ENST00000382240 1991 ntTSL 220.32■□□□□ 0.846e-8■■□□□ 14.2
RPS3P23396 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.12■□□□□ 0.816e-8■■□□□ 14.2
RPS3P23396 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20■□□□□ 0.796e-8■■□□□ 14.2
RPS3P23396 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.596e-8■■□□□ 14.2
RPS3P23396 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.4■□□□□ 0.546e-8■■□□□ 14.2
RPS3P23396 PKMYT1-220ENST00000576268 1091 ntTSL 317.87■□□□□ 0.456e-8■■□□□ 14.2
RPS3P23396 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.02■□□□□ 0.166e-8■■□□□ 14.2
RPS3P23396 ATXN2L-226ENST00000570284 701 ntTSL 515.37■□□□□ 0.056e-8■■□□□ 14.2
RPS3P23396 CMIP-212ENST00000623842 2685 nt14.87□□□□□ -0.036e-8■■□□□ 14.2
RPS3P23396 CMIP-210ENST00000569146 1589 ntTSL 514.32□□□□□ -0.126e-8■■□□□ 14.2
RPS3P23396 TIMM50-215ENST00000601252 1737 ntTSL 514.06□□□□□ -0.166e-8■■□□□ 14.2
RPS3P23396 EML2-221ENST00000590018 551 ntTSL 313.96□□□□□ -0.176e-8■■□□□ 14.2
RPS3P23396 CMIP-207ENST00000565680 556 ntTSL 413.54□□□□□ -0.246e-8■■□□□ 14.2
RPS3P23396 GRK2-202ENST00000416281 4493 ntTSL 213.49□□□□□ -0.256e-8■■□□□ 14.2
RPS3P23396 TIMM50-206ENST00000595961 2576 ntTSL 212.88□□□□□ -0.356e-8■■□□□ 14.2
RPS3P23396 EML2-222ENST00000590043 482 ntTSL 511.96□□□□□ -0.496e-8■■□□□ 14.2
RPS3P23396 TIMM50-208ENST00000597552 369 ntTSL 29.63□□□□□ -0.876e-8■■□□□ 14.2
RPS3P23396 GLB1-207ENST00000440656 626 ntTSL 48.57□□□□□ -1.042e-8■■□□□ 14.2
RPS3P23396 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.24□□□□□ -1.416e-8■■□□□ 14.2
RPS3P23396 GLB1-206ENST00000438227 569 ntTSL 46□□□□□ -1.452e-8■■□□□ 14.2
RPS3P23396 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.09□□□□□ -2.076e-8■■□□□ 14.2
RPS3P23396 CCND1-206ENST00000545484 430 ntTSL 520.82■□□□□ 0.924e-10■■□□□ 14.2
RPS3P23396 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.56■□□□□ 0.082e-6■■□□□ 14.2
RPS3P23396 DUSP6-201ENST00000279488 4400 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.752e-6■■□□□ 14.2
RPS3P23396 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.195e-17■■□□□ 14.2
RPS3P23396 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.225e-17■■□□□ 14.2
RPS3P23396 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.235e-17■■□□□ 14.2
RPS3P23396 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.345e-17■■□□□ 14.2
RPS3P23396 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.355e-17■■□□□ 14.2
RPS3P23396 PRAME-213ENST00000492657 2831 ntTSL 1 (best)12.62□□□□□ -0.395e-17■■□□□ 14.2
RPS3P23396 POR-219ENST00000471238 600 ntTSL 317.01■□□□□ 0.312e-13■■□□□ 14.2
RPS3P23396 NDUFC1-207ENST00000507764 838 ntTSL 215□□□□□ -0.014e-10■■□□□ 14.2
RPS3P23396 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.397e-7■■□□□ 14.2
RPS3P23396 GREB1-210ENST00000628795 438 ntTSL 54.67□□□□□ -1.665e-7■■□□□ 14.2
RPS3P23396 FBLN1-205ENST00000411478 568 ntTSL 413.53□□□□□ -0.241e-11■■□□□ 14.2
RPS3P23396 ACAA1-213ENST00000465181 656 ntTSL 311.99□□□□□ -0.498e-8■■□□□ 14.2
RPS3P23396 CYBA-202ENST00000561972 464 ntTSL 315.63■□□□□ 0.093e-18■■□□□ 14.2
RPS3P23396 ATP2A2-203ENST00000377685 5702 ntTSL 520.98■□□□□ 0.953e-7■■□□□ 14.2
RPS3P23396 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.413e-7■■□□□ 14.2
RPS3P23396 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -06e-8■■□□□ 14.2
RPS3P23396 ANAPC7-211ENST00000552087 910 ntTSL 514.9□□□□□ -0.026e-8■■□□□ 14.2
RPS3P23396 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC12.89□□□□□ -0.356e-8■■□□□ 14.2
RPS3P23396 ANAPC7-206ENST00000481473 1836 ntTSL 1 (best)12.55□□□□□ -0.46e-8■■□□□ 14.2
RPS3P23396 SARNP-201ENST00000336133 926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.66e-8■■□□□ 14.2
RPS3P23396 SARNP-202ENST00000546604 1163 ntTSL 210.7□□□□□ -0.76e-8■■□□□ 14.2
RPS3P23396 ALDH1A2-207ENST00000558231 1664 ntTSL 2 BASIC10.61□□□□□ -0.716e-8■■□□□ 14.2
RPS3P23396 ALDH1A2-202ENST00000347587 3297 ntTSL 1 (best) BASIC10.24□□□□□ -0.776e-8■■□□□ 14.2
RPS3P23396 ALDH1A2-203ENST00000430119 3049 ntTSL 29.7□□□□□ -0.866e-8■■□□□ 14.2
RPS3P23396 ALDH1A2-217ENST00000559517 1468 ntTSL 1 (best) BASIC9.61□□□□□ -0.876e-8■■□□□ 14.2
RPS3P23396 ALDH1A2-221ENST00000560312 3146 ntTSL 1 (best)8.84□□□□□ -0.996e-8■■□□□ 14.2
RPS3P23396 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.156e-8■■□□□ 14.2
RPS3P23396 OCIAD1-206ENST00000502972 1916 ntTSL 27.66□□□□□ -1.186e-8■■□□□ 14.2
RPS3P23396 SARNP-205ENST00000552884 997 ntTSL 1 (best)6.71□□□□□ -1.346e-8■■□□□ 14.2
RPS3P23396 ANAPC7-207ENST00000486321 748 ntTSL 24.84□□□□□ -1.636e-8■■□□□ 14.2
RPS3P23396 SARNP-206ENST00000552946 518 ntTSL 23.39□□□□□ -1.876e-8■■□□□ 14.2
RPS3P23396 ETFA-212ENST00000560179 650 ntTSL 21.22□□□□□ -2.216e-8■■□□□ 14.2
RPS3P23396 ETFA-204ENST00000557975 1086 ntTSL 30.47□□□□□ -2.336e-8■■□□□ 14.2
RPS3P23396 OCIAD1-214ENST00000508329 448 ntTSL 5-0.4□□□□□ -2.476e-8■■□□□ 14.2
RPS3P23396 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.73■□□□□ 0.274e-14■■□□□ 14.2
RPS3P23396 ADAM10-216ENST00000561149 529 ntTSL 416.61■□□□□ 0.254e-14■■□□□ 14.2
RPS3P23396 ADAM10-212ENST00000558004 587 ntTSL 516.58■□□□□ 0.244e-14■■□□□ 14.2
RPS3P23396 ADAM10-213ENST00000558733 995 ntTSL 314.19□□□□□ -0.144e-14■■□□□ 14.2
RPS3P23396 ADAM10-215ENST00000560608 587 ntTSL 413.62□□□□□ -0.234e-14■■□□□ 14.2
RPS3P23396 ADAM10-204ENST00000439637 601 ntTSL 313.51□□□□□ -0.254e-14■■□□□ 14.2
RPS3P23396 P4HB-210ENST00000476482 765 ntTSL 1 (best)12.5□□□□□ -0.412e-22■■□□□ 14.2
RPS3P23396 TKFC-218ENST00000533853 460 ntTSL 310.5□□□□□ -0.731e-6■■□□□ 14.1
RPS3P23396 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.48■□□□□ 0.392e-6■■□□□ 14.1
RPS3P23396 DANCR-203ENST00000441504 336 ntTSL 217.06■□□□□ 0.322e-6■■□□□ 14.1
RPS3P23396 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.33■□□□□ 0.22e-6■■□□□ 14.1
RPS3P23396 DANCR-202ENST00000425653 823 ntTSL 1 (best)16.33■□□□□ 0.22e-6■■□□□ 14.1
RPS3P23396 TMEM214-213ENST00000495312 804 ntTSL 226.58■■□□□ 1.852e-6■■□□□ 14.1
RPS3P23396 C20orf27-203ENST00000399672 1734 ntAPPRIS P1 TSL 225.69■■□□□ 1.72e-6■■□□□ 14.1
RPS3P23396 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.693e-9■■□□□ 14.1
RPS3P23396 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.672e-6■■□□□ 14.1
RPS3P23396 SRSF9-202ENST00000546942 946 ntTSL 1 (best)25.49■■□□□ 1.672e-6■■□□□ 14.1
RPS3P23396 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.513e-9■■□□□ 14.1
RPS3P23396 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.482e-6■■□□□ 14.1
RPS3P23396 ASRGL1-209ENST00000534183 1177 ntTSL 1 (best)24.12■■□□□ 1.452e-6■■□□□ 14.1
Retrieved 100 of 24,271 protein–RNA pairs in 199.6 ms