Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
CCL1P22362 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCL1P22362 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
CCL1P22362 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CCL1P22362 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 AL031731.1-201ENST00000642131 2094 ntBASIC14.51□□□□□ -0.09
CCL1P22362 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.51□□□□□ -0.09
CCL1P22362 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CCL1P22362 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 ELK2BP-201ENST00000415014 1224 ntBASIC14.51□□□□□ -0.09
CCL1P22362 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL1P22362 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 HCG4P8-203ENST00000443049 980 ntBASIC14.51□□□□□ -0.09
CCL1P22362 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
CCL1P22362 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.51□□□□□ -0.09
CCL1P22362 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.51□□□□□ -0.09
CCL1P22362 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 AC091304.2-201ENST00000564639 760 ntBASIC14.51□□□□□ -0.09
CCL1P22362 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL1P22362 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CCL1P22362 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL1P22362 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.51□□□□□ -0.09
CCL1P22362 AC006557.2-201ENST00000592985 1240 ntBASIC14.51□□□□□ -0.09
CCL1P22362 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL1P22362 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL1P22362 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCL1P22362 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCL1P22362 PI4KAP1-204ENST00000612579 1703 ntBASIC14.51□□□□□ -0.09
CCL1P22362 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CCL1P22362 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL1P22362 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL1P22362 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCL1P22362 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL1P22362 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCL1P22362 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCL1P22362 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CCL1P22362 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 AKR1C7P-201ENST00000305623 895 ntBASIC14.5□□□□□ -0.09
CCL1P22362 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.5□□□□□ -0.09
CCL1P22362 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.5□□□□□ -0.09
CCL1P22362 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.5□□□□□ -0.09
CCL1P22362 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CCL1P22362 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 AC107918.2-201ENST00000530817 355 ntBASIC14.5□□□□□ -0.09
CCL1P22362 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
CCL1P22362 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CCL1P22362 AC006504.4-201ENST00000592118 1568 ntBASIC14.5□□□□□ -0.09
CCL1P22362 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL1P22362 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms