Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RAB3BP20337 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 KRT8P10-201ENST00000450021 1447 ntBASIC14.84□□□□□ -0.03
RAB3BP20337 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB3BP20337 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAB3BP20337 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB3BP20337 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB3BP20337 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB3BP20337 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 STK19B-204ENST00000512515 211 ntBASIC14.84□□□□□ -0.03
RAB3BP20337 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB3BP20337 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RAB3BP20337 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 AL023973.1-201ENST00000624619 620 ntBASIC14.84□□□□□ -0.03
RAB3BP20337 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB3BP20337 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 KRT17P2-201ENST00000300992 1314 ntBASIC14.84□□□□□ -0.03
RAB3BP20337 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB3BP20337 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB3BP20337 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB3BP20337 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3BP20337 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3BP20337 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3BP20337 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3BP20337 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.83□□□□□ -0.03
RAB3BP20337 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.83□□□□□ -0.03
RAB3BP20337 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3BP20337 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RAB3BP20337 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAB3BP20337 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
RAB3BP20337 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3BP20337 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
RAB3BP20337 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RAB3BP20337 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3BP20337 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB3BP20337 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3BP20337 AC140113.3-201ENST00000605663 199 ntBASIC14.83□□□□□ -0.04
RAB3BP20337 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RAB3BP20337 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3BP20337 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3BP20337 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3BP20337 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RAB3BP20337 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3BP20337 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RAB3BP20337 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RAB3BP20337 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3BP20337 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
RAB3BP20337 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB3BP20337 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB3BP20337 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
RAB3BP20337 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms