Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ERCC2P18074 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC2P18074 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ERCC2P18074 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC2P18074 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
ERCC2P18074 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 IGLL3P-201ENST00000412472 434 ntBASIC17.35■□□□□ 0.37
ERCC2P18074 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.35■□□□□ 0.37
ERCC2P18074 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 CXCL1P1-201ENST00000502804 216 ntBASIC17.35■□□□□ 0.37
ERCC2P18074 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.35■□□□□ 0.37
ERCC2P18074 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC2P18074 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.35■□□□□ 0.37
ERCC2P18074 AC005412.3-201ENST00000580309 715 ntBASIC17.35■□□□□ 0.37
ERCC2P18074 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC2P18074 ACTL9-202ENST00000612068 1252 ntBASIC17.35■□□□□ 0.37
ERCC2P18074 BX640515.1-201ENST00000617215 977 ntBASIC17.35■□□□□ 0.37
ERCC2P18074 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
ERCC2P18074 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.35■□□□□ 0.37
ERCC2P18074 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ERCC2P18074 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC2P18074 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.35■□□□□ 0.37
ERCC2P18074 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
ERCC2P18074 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 HLA-A-202ENST00000376806 1854 ntBASIC17.35■□□□□ 0.37
ERCC2P18074 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ERCC2P18074 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC2P18074 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC2P18074 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.35■□□□□ 0.37
ERCC2P18074 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC2P18074 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC2P18074 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC2P18074 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC2P18074 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC2P18074 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC2P18074 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC2P18074 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ERCC2P18074 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC2P18074 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ERCC2P18074 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.34■□□□□ 0.37
ERCC2P18074 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC2P18074 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.34■□□□□ 0.37
ERCC2P18074 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC2P18074 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC2P18074 HCG4B-203ENST00000450128 991 ntBASIC17.34■□□□□ 0.37
ERCC2P18074 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC2P18074 PCDHA14-201ENST00000506751 2298 ntBASIC17.34■□□□□ 0.37
ERCC2P18074 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.34■□□□□ 0.37
ERCC2P18074 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC2P18074 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC2P18074 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.34■□□□□ 0.37
ERCC2P18074 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC2P18074 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.34■□□□□ 0.37
ERCC2P18074 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.34■□□□□ 0.37
ERCC2P18074 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ERCC2P18074 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ERCC2P18074 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC2P18074 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.34■□□□□ 0.37
ERCC2P18074 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC2P18074 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.34■□□□□ 0.37
ERCC2P18074 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC2P18074 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ERCC2P18074 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ERCC2P18074 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.34■□□□□ 0.37
ERCC2P18074 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC2P18074 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ERCC2P18074 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.33■□□□□ 0.37
ERCC2P18074 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ERCC2P18074 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ERCC2P18074 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ERCC2P18074 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ERCC2P18074 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
ERCC2P18074 SNX33P1-201ENST00000592116 1762 ntBASIC17.33■□□□□ 0.37
ERCC2P18074 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ERCC2P18074 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.33■□□□□ 0.37
ERCC2P18074 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ERCC2P18074 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
ERCC2P18074 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ERCC2P18074 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms