Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 FRMD8P1-201ENST00000440433 1524 ntBASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 AC087499.5-201ENST00000452760 1342 ntBASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 HLA-V-201ENST00000429037 534 ntBASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CSB-PGBD3P0DP91 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSB-PGBD3P0DP91 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 RPL37AP1-201ENST00000412502 279 ntBASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 ARSEP1-201ENST00000420443 635 ntBASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 LITAF-210ENST00000571976 548 ntTSL 2 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 LITAF-214ENST00000574703 486 ntTSL 2 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 AL844908.2-201ENST00000609461 460 ntBASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CSB-PGBD3P0DP91 AC138969.3-201ENST00000546612 1459 ntBASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 AC138932.2-201ENST00000548268 1459 ntBASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 AC126755.4-201ENST00000549796 1459 ntBASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 COMP-202ENST00000425807 2292 ntTSL 2 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 AC016396.2-201ENST00000562575 1417 ntBASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms